Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 APOOP3-201ENST00000536787 586 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AL121821.2-201ENST00000556081 394 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 TRAV28-201ENST00000557548 323 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 MIR5047-201ENST00000579212 100 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AL627309.6-201ENST00000606857 840 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AL133215.3-201ENST00000609801 448 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 AC006023.2-201ENST00000609916 167 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 SNORD39.4-201ENST00000620099 78 ntBASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.48□□□□□ -1.85
ATG4AQ8WYN0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC106871.1-201ENST00000568324 3102 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU6-50P-201ENST00000362356 103 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU4-35P-201ENST00000362588 141 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU6-593P-201ENST00000364716 112 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AL359837.1-201ENST00000381357 287 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 SNORA5A-201ENST00000384111 134 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU6-43P-201ENST00000384302 107 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 Y_RNA.482-201ENST00000384377 111 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU6-328P-201ENST00000390887 106 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 Y_RNA.579-201ENST00000390939 94 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 snosnR66.1-201ENST00000391095 99 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU2-3P-201ENST00000410144 191 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 CYCSP33-201ENST00000414485 327 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 SYF2P2-201ENST00000417620 583 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU7-152P-201ENST00000458982 64 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC130509.1-201ENST00000464158 433 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 HMGB3P15-201ENST00000507326 574 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU6-1170P-201ENST00000515974 106 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU1-95P-201ENST00000516357 160 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 SCARNA15.1-201ENST00000516384 125 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNU1-128P-201ENST00000516704 160 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RNA5SP468-201ENST00000516782 93 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC025423.5-201ENST00000550230 219 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AL163153.1-201ENST00000554223 283 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC084781.2-201ENST00000615568 161 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 RMST_4.1-201ENST00000616886 107 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC090971.5-201ENST00000621102 293 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC034229.5-201ENST00000624258 185 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC005183.1-201ENST00000603687 1979 ntBASIC3.47□□□□□ -1.85
ATG4AQ8WYN0 AC007785.2-201ENST00000598627 1916 ntBASIC3.46□□□□□ -1.85
ATG4AQ8WYN0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AC017071.1-201ENST00000564407 2204 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 SNORD56.3-201ENST00000363507 71 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 SNORA75B-201ENST00000384053 137 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 RNU6-214P-201ENST00000384130 107 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 RNU6-601P-201ENST00000384540 107 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 MIR493-201ENST00000385254 89 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 ATG3P1-201ENST00000419507 911 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 MYL8P-204ENST00000431574 518 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 Z82210.1-201ENST00000440037 231 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 RNU7-170P-201ENST00000459303 61 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 RNU1-143P-201ENST00000516296 146 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 SNORA64.4-201ENST00000516632 81 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 IGKV2-26-201ENST00000518305 343 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 TRAV37-201ENST00000553906 342 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AC074050.1-201ENST00000563247 211 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AC100830.2-201ENST00000581636 240 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AC124303.1-201ENST00000605703 360 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 U1.23-201ENST00000610293 146 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 RNU1-68P-201ENST00000615382 146 ntBASIC3.46□□□□□ -1.86
ATG4AQ8WYN0 AC010378.1-201ENST00000619270 362 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms