Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 Y_RNA.38-201ENST00000362617 102 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-1283P-201ENST00000365314 105 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 SNORA54-201ENST00000384281 123 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 MIR301A-201ENST00000385261 86 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 SNORA48.2-201ENST00000390926 124 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 CISD1P1-201ENST00000393907 327 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 UBE2V1P2-201ENST00000397758 440 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 ZNF863P-201ENST00000426746 417 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 MTND1P2-201ENST00000430604 821 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 GPM6BP2-201ENST00000432046 144 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 GPM6BP1-201ENST00000446387 144 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 SNRPFP3-201ENST00000457792 225 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 RNU7-180P-201ENST00000459240 63 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 TRBV1-201ENST00000476502 284 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AC092989.1-201ENST00000481235 277 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 RPL38P4-201ENST00000502376 214 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 SUMO2P6-201ENST00000505273 288 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-143P-201ENST00000516942 93 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AP003122.3-201ENST00000526316 255 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AC084851.1-201ENST00000529105 249 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AL137161.1-201ENST00000532231 390 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 HSPE1P7-201ENST00000604681 321 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AL158032.1-201ENST00000605401 106 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AC090115.4-201ENST00000609970 188 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AC107871.2-201ENST00000612894 502 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 AL138880.2-201ENST00000616214 239 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 MIR8057-201ENST00000620957 69 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 Z99571.1-201ENST00000636677 394 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 FAM35BP-202ENST00000497389 3337 ntBASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC44A1Q8WWI5 ASNSP3-201ENST00000451989 1306 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 RPL9P7-201ENST00000330965 580 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 Y_RNA.295-201ENST00000364918 102 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-877P-201ENST00000383868 107 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-140P-201ENST00000384566 108 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 RNA5SP252-201ENST00000391131 119 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 SNORD88.1-201ENST00000408684 91 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 EEF1A1P40-201ENST00000412883 573 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AL353678.1-201ENST00000422735 741 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AL139415.2-201ENST00000431968 163 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AL031183.1-201ENST00000457667 207 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 RPS15AP34-201ENST00000487776 387 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AC006445.2-201ENST00000510061 472 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 RNA5SP401-201ENST00000515920 127 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-1315P-201ENST00000517187 99 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 PSMA2P1-201ENST00000526365 646 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 MIR4424-201ENST00000585257 86 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AC012493.2-201ENST00000595083 291 ntBASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC44A1Q8WWI5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 RNU6-1035P-201ENST00000384477 107 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 MIR181A2-201ENST00000384863 110 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 RNA5SP118-201ENST00000410385 109 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AC006028.1-201ENST00000438379 402 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 MTCO3P18-201ENST00000440206 761 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 RNU4-29P-201ENST00000515943 174 ntBASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.94□□□□□ -1.94
SLC44A1Q8WWI5 SUB1P1-201ENST00000524415 382 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms