Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 BX682237.1-201ENST00000415016 335 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 SKA2P1-201ENST00000425592 390 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AC006028.1-201ENST00000438379 402 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 Z75741.1-201ENST00000446793 314 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 RPL9P32-201ENST00000464118 620 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 DYNLL1P5-201ENST00000467158 270 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AC110794.1-201ENST00000505816 425 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 HIGD1AP13-201ENST00000509878 289 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 SNORA31.3-201ENST00000516029 96 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 SNORA70.19-201ENST00000516717 90 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 SNORA31.22-201ENST00000517204 135 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 COPS8P3-201ENST00000526024 482 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AC106782.4-201ENST00000568264 210 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 MIR3690-201ENST00000580266 75 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AL138889.2-201ENST00000603883 242 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AC080078.3-201ENST00000605407 463 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AC084781.2-201ENST00000615568 161 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AC098657.3-201ENST00000620434 263 ntBASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF548Q8NEK5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AC010733.2-201ENST00000589496 5702 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 RNA5SP374-201ENST00000362939 125 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 RNU6-1252P-201ENST00000363054 104 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 Y_RNA.422-201ENST00000384054 114 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AL139397.2-201ENST00000404529 772 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 HSPE1P26-201ENST00000405341 275 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 RPL37P10-201ENST00000412884 288 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 RPL23AP82-202ENST00000427528 469 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AC079780.1-201ENST00000428259 207 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AL669831.1-202ENST00000428504 417 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AC104058.1-201ENST00000448028 297 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 snoU13.4-201ENST00000458916 104 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AC130509.1-201ENST00000464158 433 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 RN7SL442P-201ENST00000473804 320 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AP001086.1-201ENST00000494882 321 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 APOOP4-201ENST00000513530 597 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AC007151.1-201ENST00000572774 483 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 MIR4790-201ENST00000577799 79 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 MIR5004-201ENST00000579078 107 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AC007619.2-201ENST00000605743 379 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AL355802.3-201ENST00000607571 545 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 DUSP12P1-201ENST00000612874 516 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 AL138726.1-201ENST00000614873 333 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 FAM157A-202ENST00000615155 405 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 MIR7153-201ENST00000637758 57 ntBASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZNF548Q8NEK5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 Y_RNA.187-201ENST00000363918 113 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 Y_RNA.216-201ENST00000364205 93 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 SNORD116-11-201ENST00000383882 92 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 RNU6-1160P-201ENST00000384546 104 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 MIR634-201ENST00000385208 97 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 RNA5SP219-201ENST00000390940 113 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 SNORD70.1-201ENST00000391007 85 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 RNU6-882P-201ENST00000391025 103 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 SNORA48.5-201ENST00000391143 135 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 AL357075.1-201ENST00000404107 726 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 RNU2-71P-201ENST00000411395 189 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 ATG3P1-201ENST00000419507 911 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 AL591704.1-201ENST00000432574 275 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 TXNP1-201ENST00000441872 371 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 RPL32P28-201ENST00000443577 397 ntBASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.29□□□□□ -1.88
ZNF548Q8NEK5 HMGB3P8-201ENST00000449709 577 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms