Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC079598.5-201ENST00000547460 117 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC012435.1-202ENST00000568772 240 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC022662.1-201ENST00000580252 331 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 MIR4293-201ENST00000584305 78 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC013470.4-201ENST00000619978 986 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC091953.2-201ENST00000623979 160 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AL136313.1-201ENST00000624804 202 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC099654.9-201ENST00000637055 678 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC241585.2-209ENST00000638217 143 ntBASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.55□□□□□ -2.16
ZIC4Q8N9L1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 RNU5A-8P-201ENST00000364102 114 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 RNU6-188P-201ENST00000364207 107 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 RNU6-234P-201ENST00000365229 104 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AL512604.1-201ENST00000404812 257 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 RPS3AP37-201ENST00000419176 745 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AL160275.3-201ENST00000423876 471 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC112771.1-201ENST00000463581 102 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 RNU6-250P-201ENST00000516958 103 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 SNORA31.23-201ENST00000517219 133 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AP000907.2-201ENST00000530827 353 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 MIR3122-201ENST00000577243 73 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 BNIP3P9-201ENST00000603714 553 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC104763.2-201ENST00000604179 382 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC034229.4-201ENST00000607861 441 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC012150.2-201ENST00000621300 544 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC138627.2-201ENST00000624202 601 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 AC099654.8-201ENST00000637757 681 ntBASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
ZIC4Q8N9L1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC138393.1-203ENST00000327086 343 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 RNU6-1159P-201ENST00000362933 107 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 RNU5E-10P-201ENST00000363506 118 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 RNU6-817P-201ENST00000391083 104 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 OR51A5P-201ENST00000415429 942 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 MTND4P25-201ENST00000441039 533 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 NEFMP1-201ENST00000443423 1006 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 MTCO1P42-201ENST00000457379 726 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 PMCHL2-203ENST00000457791 237 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 RNU6-953P-201ENST00000459154 107 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC140059.1-201ENST00000489238 361 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 RPL39P36-201ENST00000490784 156 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC023194.1-201ENST00000493084 308 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 FAM92A1P2-202ENST00000504766 877 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AP006587.4-201ENST00000526053 529 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 RPS3AP4-201ENST00000555161 764 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 PSMA3P-201ENST00000555485 635 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 DUXAP1-201ENST00000556632 463 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 LINC00933-203ENST00000559812 219 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC104581.2-201ENST00000572227 430 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC112220.3-201ENST00000605502 502 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC087045.1-201ENST00000605856 382 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC072039.2-201ENST00000608883 439 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AL627230.6-201ENST00000611129 280 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC008121.3-201ENST00000618726 433 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC006386.1-201ENST00000619436 415 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC017037.3-201ENST00000625016 472 ntBASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.53□□□□□ -2.16
ZIC4Q8N9L1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 MIR561-201ENST00000385216 97 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 TXNL1P1-201ENST00000429528 554 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AL592045.1-201ENST00000429867 352 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 DNAJC19P4-201ENST00000440115 345 ntBASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.52□□□□□ -2.17
ZIC4Q8N9L1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms