Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 USP9YP13-201ENST00000417797 480 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 USP9YP26-201ENST00000421008 661 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 USP9YP18-201ENST00000425912 695 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 RPL7P34-201ENST00000433316 712 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 CALM1P1-201ENST00000442082 433 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 USP9YP17-201ENST00000444617 696 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 RPL9P9-202ENST00000466501 579 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 AP001025.1-201ENST00000486139 332 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 NACAP3-201ENST00000552100 481 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 AC012414.6-201ENST00000568241 401 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 VN1R107P-201ENST00000601784 209 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 AL020997.3-201ENST00000602843 359 ntBASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TTC9CQ8N5M4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 RNU6-778P-201ENST00000363269 103 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 SNORA29-201ENST00000384183 140 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 MIR597-201ENST00000384968 97 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 RNU11-5P-201ENST00000391216 129 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 RN7SKP61-201ENST00000410642 295 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 RNA5SP100-201ENST00000410903 110 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 RNA5SP59-201ENST00000410922 110 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 AC097463.2-201ENST00000421074 142 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 PSMA6P3-201ENST00000428242 164 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 BOLA3P3-201ENST00000505182 232 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 AC109927.2-201ENST00000506416 303 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 CENPUP1-201ENST00000526649 1202 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 CBX3P8-201ENST00000532412 525 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 AC044913.1-201ENST00000557200 430 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 ROCK1P1-201ENST00000573767 549 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 CYP2C61P-201ENST00000604072 290 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 ELOCP5-201ENST00000604924 333 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 AF129408.1-201ENST00000608767 431 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 AP005229.2-201ENST00000609980 697 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 AC024257.5-201ENST00000612739 531 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 AC104820.1-201ENST00000624183 307 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 AL136313.1-201ENST00000624804 202 ntBASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
TTC9CQ8N5M4 MIR337-201ENST00000362281 93 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 SNORD114-27-201ENST00000363766 70 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 SNORA18.2-201ENST00000383865 132 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 RNU6-77P-201ENST00000410554 91 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 CYCSP33-201ENST00000414485 327 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 FAM204CP-201ENST00000424489 642 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 CR848007.2-201ENST00000424918 787 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 RPS27P16-201ENST00000425758 201 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 MTCYBP32-201ENST00000427945 1084 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 UBE2V2P3-201ENST00000433562 437 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AL161651.1-201ENST00000440882 223 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 ARL2BPP5-201ENST00000523141 481 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AC090079.2-201ENST00000575289 768 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 MIR3973-201ENST00000579824 107 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 BNIP3P27-201ENST00000599991 412 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AL078604.3-201ENST00000615580 211 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AC091965.5-201ENST00000624785 342 ntBASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.64□□□□□ -2.31
TTC9CQ8N5M4 ICE2P2-201ENST00000483823 2787 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 MIR302D-201ENST00000362275 68 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 CCDC58P2-201ENST00000417131 366 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 MTCO1P44-201ENST00000441935 243 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AL353691.1-201ENST00000451332 387 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AC108729.1-201ENST00000487812 947 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AF131216.2-201ENST00000512316 564 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 SNORA25.11-201ENST00000515935 105 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 RNU6-889P-201ENST00000517189 103 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 SULT1C2P1-202ENST00000562418 459 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 MIR4698-201ENST00000577795 80 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AC211469.2-201ENST00000605461 205 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AL109620.1-201ENST00000618738 1197 ntBASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.63□□□□□ -2.31
TTC9CQ8N5M4 AC008163.1-202ENST00000636004 2889 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms