Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC053481.4-201ENST00000583164 216 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 AC020895.1-201ENST00000595362 272 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 AP002826.1-201ENST00000608835 315 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 TUG1_4.1-201ENST00000619464 181 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 AC008568.2-201ENST00000623862 2313 ntBASIC4.83□□□□□ -1.64
CCDC116Q8IYX3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 AC104623.2-202ENST00000623477 4002 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 SNORD56.1-201ENST00000362913 68 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 RNU6-898P-201ENST00000365627 104 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 RNU6-763P-201ENST00000390865 106 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 MIR937-201ENST00000401271 86 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 RNU2-54P-201ENST00000410299 190 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 AL590383.1-201ENST00000428602 75 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 U8.19-201ENST00000459095 133 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 RN7SL443P-201ENST00000464331 290 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 AC072052.1-201ENST00000496556 306 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 AC016632.1-201ENST00000503994 196 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 SNORA72.7-201ENST00000516349 94 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 IGLV2-28-201ENST00000520681 304 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 AC006349.1-201ENST00000555526 235 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 MIR4489-201ENST00000578869 62 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 MIR3176-201ENST00000582210 90 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 AC069294.1-201ENST00000608397 350 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 AC006065.5-201ENST00000623427 349 ntBASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC116Q8IYX3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 SNORA17.1-201ENST00000362945 126 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 RNU6-1255P-201ENST00000363434 112 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 RNU6-103P-201ENST00000363686 107 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 Y_RNA.179-201ENST00000363844 90 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 SNORA2.3-201ENST00000383920 135 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 COX6CP13-201ENST00000428703 226 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 RPL23AP14-201ENST00000468281 468 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 AC011276.1-201ENST00000469688 323 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 RN7SL30P-201ENST00000488416 306 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 RN7SL629P-201ENST00000489622 285 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 RNU6-659P-201ENST00000516454 104 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 RNU6-703P-201ENST00000516946 107 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 MIR4458-201ENST00000578872 75 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 MIR1269B-201ENST00000580405 75 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 RPSAP73-201ENST00000614820 330 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 MIR4679-1-201ENST00000637619 75 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 AP001642.1-201ENST00000624727 2117 ntBASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC116Q8IYX3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC116Q8IYX3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms