Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC007151.1-201ENST00000572774 483 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC024619.4-201ENST00000580924 316 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC073544.2-201ENST00000601155 540 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 AC010329.5-201ENST00000623497 2174 ntBASIC2.22□□□□□ -2.05
CCDC65Q8IXS2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.21□□□□□ -2.05
CCDC65Q8IXS2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 RNU4-1-201ENST00000363925 141 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 Y_RNA.534-201ENST00000384599 112 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 RNU6-658P-201ENST00000384606 106 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 SNORD115.1-201ENST00000391109 76 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 FCF1P10-201ENST00000407590 479 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 OR51A5P-201ENST00000415429 942 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AC011233.1-201ENST00000422812 283 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 XKRYP1-201ENST00000423438 492 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AL592045.1-201ENST00000429867 352 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 MICF-203ENST00000432679 129 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 XKRYP2-201ENST00000432915 492 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AC026801.1-201ENST00000497178 464 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AC092104.1-201ENST00000497346 1441 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AC084851.1-201ENST00000529105 249 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AC135628.1-201ENST00000568867 534 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 MIR4513-201ENST00000581077 86 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 MIR3199-2-201ENST00000636243 86 ntBASIC2.21□□□□□ -2.06
CCDC65Q8IXS2 AC092881.1-201ENST00000638218 2733 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 RNU6-817P-201ENST00000391083 104 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 RPS12P24-201ENST00000412619 387 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 RAC1P6-201ENST00000423911 575 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AL365184.2-201ENST00000431139 435 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AL008629.1-201ENST00000438615 184 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AC068587.2-201ENST00000478386 781 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 SNORD19.2-201ENST00000516978 73 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 RNU6-1183P-201ENST00000517054 60 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 ANP32BP3-201ENST00000559213 706 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 ROCK1P1-201ENST00000573767 549 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AL627230.6-201ENST00000611129 280 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AL365204.3-201ENST00000612448 685 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 AL445523.1-201ENST00000451184 1362 ntBASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC65Q8IXS2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 RNU5F-6P-201ENST00000362979 116 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 RNU6-288P-201ENST00000363690 104 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 HMGB1P27-201ENST00000431429 603 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC004383.1-201ENST00000438135 289 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AL512286.1-201ENST00000439244 400 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 BRK1P2-201ENST00000442875 223 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 SNORD97-201ENST00000459187 142 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 MTND1P3-201ENST00000484956 952 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 RNU6-1129P-201ENST00000515964 104 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 RNU6-678P-201ENST00000516832 109 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 HSPE1P18-201ENST00000517602 280 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 FAM92A1P1-201ENST00000528023 890 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 MIR5697-201ENST00000578045 78 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 MIR4648-201ENST00000580107 72 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 NRBF2P1-201ENST00000587407 859 ntBASIC2.19□□□□□ -2.06
CCDC65Q8IXS2 AC025165.5-201ENST00000602802 578 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms