Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 AC011005.2-201ENST00000487324 359 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VRK3Q8IV63 UBE2CP3-201ENST00000502715 450 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 AC022447.4-201ENST00000504053 364 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 HNRNPCP4-201ENST00000571636 900 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 AC006130.2-201ENST00000586202 326 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 ELOCP5-201ENST00000604924 333 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 AC141273.2-201ENST00000618989 130 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 MIR4496-201ENST00000635896 61 ntBASIC3.61□□□□□ -1.83
VRK3Q8IV63 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
VRK3Q8IV63 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VRK3Q8IV63 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VRK3Q8IV63 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VRK3Q8IV63 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VRK3Q8IV63 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VRK3Q8IV63 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.6□□□□□ -1.83
VRK3Q8IV63 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.6□□□□□ -1.83
VRK3Q8IV63 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
VRK3Q8IV63 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VRK3Q8IV63 Y_RNA.151-201ENST00000363566 112 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 Y_RNA.214-201ENST00000364201 112 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 RNA5SP51-201ENST00000364750 119 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 MIR517A-201ENST00000385001 87 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 MT-TW-201ENST00000387382 68 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AL138885.1-201ENST00000405921 675 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AL137014.1-201ENST00000420490 1226 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AL133396.1-201ENST00000432048 687 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC004866.2-201ENST00000438285 481 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AL645939.1-201ENST00000453429 797 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 RPL21P41-201ENST00000459863 264 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 RN7SL542P-201ENST00000467147 294 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 RPL17P19-201ENST00000489069 552 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC114801.2-201ENST00000503825 781 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 MTND1P19-201ENST00000511780 315 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC022790.1-201ENST00000522872 204 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 HSBP1P1-201ENST00000555205 166 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 OR4H12P-201ENST00000556269 907 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
VRK3Q8IV63 MIR5188-201ENST00000583467 113 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC012669.1-201ENST00000603209 283 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC004805.2-201ENST00000605382 482 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AL355810.1-201ENST00000614629 552 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.6□□□□□ -1.83
VRK3Q8IV63 AL138825.1-201ENST00000618587 192 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.6□□□□□ -1.83
VRK3Q8IV63 MIR4275-201ENST00000636486 87 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 AC073073.2-201ENST00000609827 2578 ntBASIC3.6□□□□□ -1.83
VRK3Q8IV63 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VRK3Q8IV63 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VRK3Q8IV63 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VRK3Q8IV63 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VRK3Q8IV63 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
VRK3Q8IV63 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
VRK3Q8IV63 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VRK3Q8IV63 RNU4-42P-201ENST00000364738 142 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 Y_RNA.562-201ENST00000384695 113 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 MIR134-201ENST00000385258 73 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 BX276092.3-201ENST00000424182 230 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 RNU6-953P-201ENST00000459154 107 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 snoU13.3-201ENST00000459441 104 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 FTH1P9-201ENST00000513251 355 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 RNU6-390P-201ENST00000516259 103 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 RN7SKP83-201ENST00000516512 178 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 RNU1-45P-201ENST00000517191 141 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 OR5D17P-201ENST00000531492 978 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 AC109446.1-201ENST00000566172 220 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.59□□□□□ -1.83
VRK3Q8IV63 MIR15A-201ENST00000607334 83 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 AL591516.1-201ENST00000611326 274 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 AP000553.6-201ENST00000641242 118 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 AC007656.2-201ENST00000624902 4547 ntBASIC3.59□□□□□ -1.83
VRK3Q8IV63 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VRK3Q8IV63 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
VRK3Q8IV63 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VRK3Q8IV63 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.59□□□□□ -1.84
VRK3Q8IV63 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VRK3Q8IV63 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms