Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 MTND1P15-201ENST00000579262 949 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AC011155.2-201ENST00000623202 216 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AC006386.2-201ENST00000624491 75 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 AC012005.1-201ENST00000624575 75 ntBASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX30Q5VWJ9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 RNU6-7-201ENST00000364784 107 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 RNU6-8-201ENST00000365467 107 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 MYL8P-204ENST00000431574 518 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AL161651.1-201ENST00000440882 223 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 MTND1P18-201ENST00000448191 573 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 NDUFB1P2-201ENST00000449477 176 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AL356010.1-201ENST00000456364 102 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AL441985.1-201ENST00000457727 251 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 RPL21P41-201ENST00000459863 264 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 HMGB1P30-201ENST00000492455 606 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AC008716.1-201ENST00000511084 513 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AC105417.1-201ENST00000514691 285 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 RNU6-56P-201ENST00000516986 93 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AL121821.2-201ENST00000556081 394 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AC009063.1-201ENST00000563342 702 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AC234778.2-201ENST00000566241 354 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AC007684.1-201ENST00000609671 477 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 Z99129.1-201ENST00000612510 255 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 MIR6134-201ENST00000617606 109 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 CKAP2P1-201ENST00000555477 2049 ntBASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNX30Q5VWJ9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 RN7SKP226-201ENST00000364912 300 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 RNU6-259P-201ENST00000383999 107 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 RNU6-116P-201ENST00000384042 109 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 Y_RNA.436-201ENST00000384097 102 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 RNU6-166P-201ENST00000384371 107 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 Y_RNA.510-201ENST00000384511 114 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 MIR34A-201ENST00000385130 110 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 RNU2-9P-201ENST00000410194 145 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AL513477.1-202ENST00000417061 214 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AC010975.2-201ENST00000427781 588 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AL627311.1-201ENST00000431514 115 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 RNA5SP367-201ENST00000516557 118 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 CYCSP39-201ENST00000565821 309 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 ELOCP29-201ENST00000588193 334 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 DEFB131E-202ENST00000602581 683 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AL391813.1-201ENST00000603098 260 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AC025449.1-201ENST00000603896 529 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 AL359740.1-201ENST00000624340 592 ntBASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX30Q5VWJ9 ZNF680P1-201ENST00000436625 1469 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 CDC27P3-201ENST00000635418 1910 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 Y_RNA.1-201ENST00000352915 104 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 RNU6-1029P-201ENST00000384109 107 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 RNU6-550P-201ENST00000391057 101 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 RPL21P75-201ENST00000396599 483 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 RPL21P28-201ENST00000401418 483 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 AL592114.1-201ENST00000403842 483 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 SNORD88.1-201ENST00000408684 91 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 RNU2-66P-201ENST00000410650 161 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 RNU4-55P-201ENST00000410731 137 ntBASIC3.03□□□□□ -1.92
SNX30Q5VWJ9 Y_RNA.623-201ENST00000411128 95 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms