| HES3 | Q5TGS1 | AC005410.1-202 | ENST00000460347 | 485 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | NMTRQ-TTG12-1-201 | ENST00000467595 | 72 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | GUCA1C-203 | ENST00000471108 | 633 nt | TSL 2 BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC010631.1-201 | ENST00000474150 | 156 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC018437.1-201 | ENST00000492214 | 406 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | SUMO2P5-201 | ENST00000506790 | 245 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC079395.1-201 | ENST00000510981 | 262 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | LINC02241-202 | ENST00000512688 | 467 nt | TSL 3 BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | SMIM18-201 | ENST00000517349 | 905 nt | APPRIS P1 TSL 2 BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC108449.1-202 | ENST00000517632 | 478 nt | TSL 3 BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | CBX3P4-201 | ENST00000538909 | 354 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC008083.3-202 | ENST00000552063 | 277 nt | TSL 3 BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | DUXAP1-201 | ENST00000556632 | 463 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC011477.3-201 | ENST00000585571 | 403 nt | TSL 5 BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | UBE2L4-201 | ENST00000587688 | 464 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | LINC01897-203 | ENST00000591503 | 369 nt | TSL 2 BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL109918.3-201 | ENST00000603072 | 338 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | RPL21P136-201 | ENST00000605378 | 396 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC245297.2-201 | ENST00000610119 | 565 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL158163.2-201 | ENST00000619110 | 700 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | uc_338.20-201 | ENST00000621563 | 178 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL158801.5-201 | ENST00000623123 | 465 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC131280.1-202 | ENST00000624067 | 4211 nt | BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC003984.1-201 | ENST00000450977 | 4104 nt | TSL 1 (best) BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | LINC01111-201 | ENST00000518732 | 1663 nt | TSL 1 (best) BASIC | 1.58 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | ZNF876P-202 | ENST00000398732 | 1485 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | MUC15-202 | ENST00000436318 | 3118 nt | TSL 5 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | HSPE1P11-201 | ENST00000339579 | 310 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | RNU6-289P-201 | ENST00000364093 | 107 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | RNU6-853P-201 | ENST00000364306 | 107 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | RNU6-392P-201 | ENST00000364926 | 101 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | RNA5SP240-201 | ENST00000365355 | 128 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | TRAJ49-201 | ENST00000390488 | 56 nt | APPRIS P1 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | ZNF468-202 | ENST00000396409 | 384 nt | TSL 5 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | MIR1302-8-201 | ENST00000408342 | 128 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | ZNF90P2-204 | ENST00000419323 | 1075 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL513185.2-201 | ENST00000425543 | 193 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC004383.1-201 | ENST00000438135 | 289 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL137159.1-201 | ENST00000452808 | 512 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | RNA5SP233-201 | ENST00000459153 | 113 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC108729.1-201 | ENST00000487812 | 947 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | LINC02428-201 | ENST00000508099 | 527 nt | TSL 5 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC021242.2-203 | ENST00000521842 | 687 nt | TSL 3 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC010376.1-201 | ENST00000522101 | 334 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | CBX3P7-201 | ENST00000532876 | 502 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | CCDC7-207 | ENST00000535327 | 700 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AP000462.2-203 | ENST00000540545 | 715 nt | TSL 5 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC008083.1-201 | ENST00000547748 | 663 nt | TSL 2 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | G2E3-AS1-202 | ENST00000550118 | 609 nt | TSL 5 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | LINC02305-201 | ENST00000554142 | 476 nt | TSL 3 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | MIR3618-201 | ENST00000580330 | 88 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC006270.3-201 | ENST00000605967 | 1036 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AF129408.1-201 | ENST00000608767 | 431 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC009233.1-201 | ENST00000616477 | 371 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC007490.1-201 | ENST00000624321 | 703 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL591030.1-201 | ENST00000626131 | 627 nt | TSL 3 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC009487.4-201 | ENST00000624969 | 3585 nt | BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | SERPINI2-209 | ENST00000616363 | 1769 nt | TSL 5 BASIC | 1.57 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | KTN1-203 | ENST00000395309 | 4021 nt | APPRIS ALT2 TSL 5 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC233981.2-201 | ENST00000611524 | 1614 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | NACAP2-201 | ENST00000318548 | 624 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | RNU6-60P-201 | ENST00000364792 | 103 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | RABGGTB-202 | ENST00000370826 | 512 nt | TSL 2 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | GSTA3-202 | ENST00000370968 | 775 nt | TSL 1 (best) BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | RNU6-658P-201 | ENST00000384606 | 106 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | SNORA67.6-201 | ENST00000391093 | 99 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL359634.1-202 | ENST00000404721 | 284 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | MIR1276-201 | ENST00000408707 | 83 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | MORN2-203 | ENST00000409131 | 544 nt | TSL 5 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | RN7SKP266-201 | ENST00000410232 | 287 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | MTCO1P17-201 | ENST00000411522 | 491 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL161909.2-201 | ENST00000417577 | 409 nt | TSL 5 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC073311.1-201 | ENST00000420146 | 505 nt | TSL 5 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL451074.3-201 | ENST00000437709 | 472 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC005538.1-201 | ENST00000455991 | 594 nt | TSL 3 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | CYP2C59P-201 | ENST00000457790 | 269 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | TOMM22P6-201 | ENST00000465035 | 409 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL163973.2-201 | ENST00000548096 | 288 nt | TSL 3 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL121821.2-201 | ENST00000556081 | 394 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | ROCK1P1-201 | ENST00000573767 | 549 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | MIR4529-201 | ENST00000578110 | 78 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | ZNF573-209 | ENST00000585724 | 453 nt | TSL 5 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC007229.1-201 | ENST00000590455 | 412 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC099811.4-201 | ENST00000592536 | 496 nt | TSL 2 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL096840.1-201 | ENST00000603287 | 93 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | SEPT7P9-203 | ENST00000604116 | 343 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL138955.1-201 | ENST00000622881 | 1040 nt | BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL391597.2-201 | ENST00000635698 | 479 nt | TSL 5 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | KIAA1107-201 | ENST00000370378 | 4622 nt | TSL 5 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | KLRA1P-202 | ENST00000510134 | 1410 nt | TSL 5 BASIC | 1.56 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | XRCC4-205 | ENST00000511817 | 1636 nt | APPRIS P4 TSL 1 (best) BASIC | 1.55 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC008555.8-201 | ENST00000623602 | 2168 nt | BASIC | 1.55 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | Y_RNA.466-201 | ENST00000384294 | 113 nt | BASIC | 1.55 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | USP9YP33-201 | ENST00000412220 | 421 nt | BASIC | 1.55 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL158840.1-201 | ENST00000414132 | 523 nt | TSL 3 BASIC | 1.55 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC083875.1-201 | ENST00000419509 | 405 nt | BASIC | 1.55 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL391069.1-201 | ENST00000422153 | 358 nt | TSL 3 BASIC | 1.55 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AIMP1P2-201 | ENST00000425294 | 312 nt | BASIC | 1.55 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AC104651.1-201 | ENST00000427559 | 735 nt | BASIC | 1.55 | □□□□□ -2.16 | | |
| HES3 | Q5TGS1 | AL353612.1-201 | ENST00000428769 | 465 nt | TSL 3 BASIC | 1.55 | □□□□□ -2.16 | | |