Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 TIMM9P3-201ENST00000428659 274 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 HMGB1P27-201ENST00000431429 603 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 UBE2V1P8-201ENST00000437166 265 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 RPS15AP7-201ENST00000439294 405 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC96Q2M329 SCARNA24.1-201ENST00000516465 137 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 RNA5SP471-201ENST00000516971 106 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 RN7SKP258-201ENST00000517151 304 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC96Q2M329 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC96Q2M329 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC96Q2M329 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC96Q2M329 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC96Q2M329 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC96Q2M329 AC004805.2-201ENST00000605382 482 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 AC006338.1-201ENST00000618453 749 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 CR381653.2-201ENST00000624041 768 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 AL136313.1-201ENST00000624804 202 ntBASIC3.26□□□□□ -1.89
CCDC96Q2M329 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC96Q2M329 AL359693.1-201ENST00000614959 2407 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 Y_RNA.22-201ENST00000362492 102 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 RNU6-1167P-201ENST00000363227 94 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 AL138827.1-201ENST00000402666 306 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 CIR1P3-201ENST00000405137 479 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC96Q2M329 AC073464.1-201ENST00000429823 534 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 UBE2DNL-203ENST00000474922 222 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 AP003034.1-201ENST00000534621 422 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 HPRT1P3-201ENST00000539521 576 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 AL359212.1-201ENST00000556608 614 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 MIR3616-201ENST00000584070 92 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 OR1M4P-201ENST00000589199 287 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 AC006023.1-201ENST00000603944 259 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 AC008277.2-201ENST00000605196 797 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC96Q2M329 U6atac.1-201ENST00000616025 117 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 SEPT14P19-203ENST00000633205 211 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 MIR6863-201ENST00000636112 90 ntBASIC3.25□□□□□ -1.89
CCDC96Q2M329 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC96Q2M329 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC96Q2M329 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC96Q2M329 AC092593.1-201ENST00000515413 1815 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC96Q2M329 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 HSPE1P11-201ENST00000339579 310 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 Y_RNA.1-201ENST00000352915 104 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 RNU6-1097P-201ENST00000363586 107 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 RNU6-1284P-201ENST00000363701 100 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 SET-203ENST00000372688 801 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 RNU6-74P-201ENST00000384235 107 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 RNU6-750P-201ENST00000390946 107 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 AL359634.1-202ENST00000404721 284 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 AC080125.1-201ENST00000414888 684 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 ELOCP4-201ENST00000420090 333 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 AC236972.1-201ENST00000433225 199 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 AC011979.2-201ENST00000527568 352 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 ARL2BPP2-201ENST00000550907 489 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 MIR3162-201ENST00000581818 82 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 ZNF861P-201ENST00000588126 639 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 AP001330.5-201ENST00000607176 411 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 AL020991.1-201ENST00000612314 373 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 AC009161.2-201ENST00000624626 138 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 AL160394.1-201ENST00000624765 724 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 MIR6733-201ENST00000635723 61 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 MIR7515-201ENST00000637837 67 ntBASIC3.24□□□□□ -1.89
CCDC96Q2M329 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC96Q2M329 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC96Q2M329 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC96Q2M329 RNU1-112P-201ENST00000364401 164 ntBASIC3.23□□□□□ -1.89
CCDC96Q2M329 RNU6-39P-201ENST00000384344 107 ntBASIC3.23□□□□□ -1.89
CCDC96Q2M329 MIR558-201ENST00000384920 94 ntBASIC3.23□□□□□ -1.89
CCDC96Q2M329 RPS4XP8-201ENST00000402039 771 ntBASIC3.23□□□□□ -1.89
CCDC96Q2M329 AL513475.1-201ENST00000406602 315 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms