Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 SNORD39.4-201ENST00000620099 78 ntBASIC4.2□□□□□ -1.74
VPS72Q15906 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS72Q15906 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS72Q15906 AC091152.2-201ENST00000591628 2569 ntBASIC4.2□□□□□ -1.74
VPS72Q15906 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS72Q15906 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS72Q15906 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
VPS72Q15906 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS72Q15906 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS72Q15906 Y_RNA.100-201ENST00000363141 102 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 Y_RNA.373-201ENST00000365600 103 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 RNU6-1029P-201ENST00000384109 107 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 AC110754.1-201ENST00000399740 601 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 RNU2-36P-201ENST00000410361 191 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS72Q15906 HSPE1P1-201ENST00000421494 318 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS72Q15906 AC236972.2-201ENST00000434979 310 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS72Q15906 MTCO3P45-201ENST00000443036 613 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 AC009237.8-201ENST00000445492 379 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS72Q15906 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.19□□□□□ -1.74
VPS72Q15906 AL513124.1-201ENST00000450410 614 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 AL118520.1-201ENST00000450770 291 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS72Q15906 RNU6-1256P-201ENST00000516539 103 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 RNA5SP503-201ENST00000517047 117 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 RPL7P20-201ENST00000520308 745 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS72Q15906 uc_338.1-201ENST00000612113 180 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 AL133216.2-202ENST00000634512 349 ntBASIC4.19□□□□□ -1.74
VPS72Q15906 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
VPS72Q15906 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS72Q15906 TPTE2P4-201ENST00000258589 1605 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS72Q15906 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS72Q15906 AL139276.1-201ENST00000311910 1001 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 AC073343.1-201ENST00000328239 651 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS72Q15906 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS72Q15906 Y_RNA.387-201ENST00000383918 102 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 RNU2-29P-201ENST00000410423 189 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS72Q15906 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 AC010095.1-201ENST00000443543 144 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS72Q15906 MTND4P17-201ENST00000470444 350 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS72Q15906 AC091885.1-201ENST00000506658 268 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 SCARNA15.2-201ENST00000516409 127 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 RNU6-64P-201ENST00000517119 105 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 AC002545.1-201ENST00000592511 181 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.18□□□□□ -1.74
VPS72Q15906 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS72Q15906 AL513302.2-201ENST00000562313 1842 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS72Q15906 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS72Q15906 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.18□□□□□ -1.74
VPS72Q15906 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS72Q15906 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS72Q15906 Y_RNA.132-201ENST00000363421 102 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 RNU6-522P-201ENST00000364497 107 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 RNU6-283P-201ENST00000364788 107 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS72Q15906 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS72Q15906 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS72Q15906 NDUFB4P7-201ENST00000423198 363 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS72Q15906 AC016696.1-201ENST00000446949 318 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 AL590664.1-201ENST00000448065 339 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 NIPA2P5-201ENST00000452282 464 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 AL162395.1-201ENST00000457882 422 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS72Q15906 UBL5P3-201ENST00000475112 231 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.17□□□□□ -1.74
VPS72Q15906 FAM206BP-201ENST00000510179 541 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS72Q15906 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS72Q15906 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS72Q15906 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS72Q15906 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS72Q15906 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.17□□□□□ -1.74
VPS72Q15906 MIR4703-201ENST00000577728 79 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 MIR4424-201ENST00000585257 86 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 AC110741.2-201ENST00000605278 268 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 MIR4727-201ENST00000622232 55 ntBASIC4.17□□□□□ -1.74
VPS72Q15906 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS72Q15906 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS72Q15906 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS72Q15906 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS72Q15906 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS72Q15906 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS72Q15906 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS72Q15906 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS72Q15906 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS72Q15906 RNA5SP508-201ENST00000411327 119 ntBASIC4.16□□□□□ -1.74
VPS72Q15906 RNA5SP107-201ENST00000411358 122 ntBASIC4.16□□□□□ -1.74
VPS72Q15906 OR6C66P-201ENST00000414917 930 ntBASIC4.16□□□□□ -1.74
VPS72Q15906 AL159169.1-201ENST00000421119 127 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 7.6 ms