Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SNORD63-201ENST00000384262 68 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 RNU6-378P-201ENST00000384324 107 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 RNU6-18P-201ENST00000384527 107 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 Z82210.1-201ENST00000440037 231 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 AC009237.8-201ENST00000445492 379 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDH1Q08174 RPL23AP75-201ENST00000491601 451 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 AC008897.1-201ENST00000494006 347 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDH1Q08174 RPL23AP88-201ENST00000605759 454 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 AL023881.1-201ENST00000621088 301 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDH1Q08174 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PCDH1Q08174 AC008568.2-201ENST00000623862 2313 ntBASIC4.41□□□□□ -1.7
PCDH1Q08174 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH1Q08174 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDH1Q08174 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PCDH1Q08174 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.4□□□□□ -1.7
PCDH1Q08174 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.4□□□□□ -1.7
PCDH1Q08174 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.4□□□□□ -1.7
PCDH1Q08174 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.4□□□□□ -1.7
PCDH1Q08174 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDH1Q08174 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PCDH1Q08174 RNU1-108P-201ENST00000362556 161 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 RNU4-90P-201ENST00000362773 141 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 RNU6-527P-201ENST00000363425 104 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 SNORA70F-201ENST00000384142 135 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 AL033519.2-201ENST00000403958 392 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 HDGFP1-201ENST00000405943 252 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 RNA5SP31-201ENST00000411144 127 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDH1Q08174 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDH1Q08174 OR4C10P-201ENST00000434991 931 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 CYCSP32-201ENST00000440548 321 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 AL353705.4-201ENST00000449661 238 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 NDUFB4P10-201ENST00000452541 359 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 NUTF2P7-201ENST00000453086 375 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 HSPE1P25-201ENST00000455484 251 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDH1Q08174 IGLV2-34-201ENST00000490007 283 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 RPL23AP49-201ENST00000492925 468 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDH1Q08174 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH1Q08174 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDH1Q08174 RMST_6.1-201ENST00000611980 203 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 SNX18P1Y-201ENST00000616231 511 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 AC241585.2-209ENST00000638217 143 ntBASIC4.4□□□□□ -1.71
PCDH1Q08174 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDH1Q08174 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH1Q08174 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH1Q08174 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDH1Q08174 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDH1Q08174 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
PCDH1Q08174 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH1Q08174 AC007390.2-201ENST00000606229 3803 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH1Q08174 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH1Q08174 AC092435.4-201ENST00000623012 4159 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 AL590240.1-201ENST00000334118 313 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 MIR411-201ENST00000362239 96 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 MIR298-201ENST00000401212 88 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PCDH1Q08174 U3.37-201ENST00000408528 213 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 SNORA74C-2-201ENST00000411179 201 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 RAB9AP3-201ENST00000412737 573 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 AC017079.2-201ENST00000416102 485 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 RAB9AP1-201ENST00000449393 573 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 RNU7-120P-201ENST00000459334 63 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 AC010326.1-201ENST00000462726 602 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 RN7SL860P-201ENST00000473738 223 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 RPL31P13-201ENST00000484151 370 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 SNORA25.14-201ENST00000516481 132 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 SNORA43.2-201ENST00000516652 128 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH1Q08174 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH1Q08174 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH1Q08174 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH1Q08174 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH1Q08174 MIR4270-201ENST00000581799 70 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 AC024153.1-201ENST00000603103 365 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 BRDTP1-201ENST00000605735 677 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 MIR6780A-201ENST00000615089 68 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PCDH1Q08174 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDH1Q08174 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDH1Q08174 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH1Q08174 AL672167.1-203ENST00000641299 2975 ntBASIC4.39□□□□□ -1.71
PCDH1Q08174 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDH1Q08174 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDH1Q08174 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDH1Q08174 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDH1Q08174 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDH1Q08174 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH1Q08174 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.38□□□□□ -1.71
PCDH1Q08174 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH1Q08174 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms