Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC245054.2-201ENST00000415639 319 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN20P56880 AC099548.1-201ENST00000421443 426 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.89□□□□□ -1.95
CLDN20P56880 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN20P56880 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.89□□□□□ -1.95
CLDN20P56880 SRIP2-201ENST00000428470 166 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 AL669831.1-202ENST00000428504 417 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 HMGB1P31-201ENST00000437242 427 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 GTF2IP13-201ENST00000438487 386 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 BRK1P2-201ENST00000442875 223 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 WASF1P1-201ENST00000447560 1131 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 AL360271.2-201ENST00000447710 161 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 AC115115.1-201ENST00000449927 248 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.89□□□□□ -1.95
CLDN20P56880 RPL21P99-201ENST00000480369 423 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 AC022493.1-201ENST00000492984 337 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 AC139453.3-201ENST00000493276 369 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 AC008716.1-201ENST00000511084 513 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 SNORA31.1-201ENST00000515993 133 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 SNORA31.5-201ENST00000516190 133 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 RNU6-358P-201ENST00000516564 75 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 RN7SKP57-201ENST00000517248 293 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 AC009902.1-201ENST00000519351 183 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN20P56880 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.89□□□□□ -1.95
CLDN20P56880 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN20P56880 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.89□□□□□ -1.95
CLDN20P56880 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN20P56880 AL355598.1-201ENST00000604169 202 ntBASIC2.89□□□□□ -1.95
CLDN20P56880 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN20P56880 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN20P56880 MTND4P35-201ENST00000604257 1375 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.88□□□□□ -1.95
CLDN20P56880 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN20P56880 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
CLDN20P56880 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN20P56880 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN20P56880 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN20P56880 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN20P56880 RNU6-82P-201ENST00000363970 107 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 Y_RNA.399-201ENST00000383955 105 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 SNORA9-201ENST00000384215 133 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 RNU6-45P-201ENST00000384471 107 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 MIR578-201ENST00000384828 96 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 MIR491-201ENST00000384877 84 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 RPL26P27-201ENST00000414397 437 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 RPL21P90-201ENST00000415692 466 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN20P56880 AL353678.1-201ENST00000422735 741 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 HMGN2P30-201ENST00000423237 256 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 TRIAP1P1-201ENST00000427062 225 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN20P56880 MYL8P-204ENST00000431574 518 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 ERLEC1P1-201ENST00000433806 578 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 RN7SL863P-201ENST00000462370 296 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 AC109925.1-201ENST00000478069 331 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 CCDC34P1-201ENST00000507441 517 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN20P56880 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.88□□□□□ -1.95
CLDN20P56880 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN20P56880 AC112206.3-201ENST00000514578 389 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.88□□□□□ -1.95
CLDN20P56880 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.88□□□□□ -1.95
CLDN20P56880 AC025755.1-201ENST00000521306 278 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 AP000867.2-201ENST00000532468 320 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 BNIP3P6-201ENST00000549284 499 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.88□□□□□ -1.95
CLDN20P56880 AC078814.3-201ENST00000553036 491 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 MTCO3P23-201ENST00000561363 289 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 AC060780.3-201ENST00000589464 80 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 AC007938.3-201ENST00000604965 623 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 RNU6-89P-201ENST00000606519 100 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.88□□□□□ -1.95
CLDN20P56880 AP003400.5-201ENST00000624827 617 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.88□□□□□ -1.95
CLDN20P56880 U2.21-201ENST00000637295 81 ntBASIC2.88□□□□□ -1.95
CLDN20P56880 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLDN20P56880 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.87□□□□□ -1.95
CLDN20P56880 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.87□□□□□ -1.95
CLDN20P56880 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLDN20P56880 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.87□□□□□ -1.95
CLDN20P56880 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLDN20P56880 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CLDN20P56880 MIR412-201ENST00000362142 91 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 RNA5SP374-201ENST00000362939 125 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 RNU6-778P-201ENST00000363269 103 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 Y_RNA.157-201ENST00000363638 102 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 RNU6-884P-201ENST00000363889 107 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 SNORA75B-201ENST00000384053 137 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CLDN20P56880 SNORA16.2-201ENST00000390991 127 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 FGF7P8-201ENST00000402994 292 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 RNU4-47P-201ENST00000410876 114 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 AL139413.1-201ENST00000421309 217 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.87□□□□□ -1.95
CLDN20P56880 AC098614.2-201ENST00000426040 255 ntBASIC2.87□□□□□ -1.95
CLDN20P56880 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.87□□□□□ -1.95
CLDN20P56880 AL353705.1-201ENST00000433468 480 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms