Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEK3P51956 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NEK3P51956 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NEK3P51956 Y_RNA.333-201ENST00000365274 102 ntBASIC3.49□□□□□ -1.85
NEK3P51956 RNU6-898P-201ENST00000365627 104 ntBASIC3.49□□□□□ -1.85
NEK3P51956 RNU6-72P-201ENST00000384285 79 ntBASIC3.49□□□□□ -1.85
NEK3P51956 BTF3P7-201ENST00000407097 488 ntBASIC3.49□□□□□ -1.85
NEK3P51956 SNORA11.1-201ENST00000408133 129 ntBASIC3.49□□□□□ -1.85
NEK3P51956 RN7SKP111-201ENST00000410349 271 ntBASIC3.49□□□□□ -1.85
NEK3P51956 PTGES3P4-201ENST00000426243 356 ntBASIC3.49□□□□□ -1.85
NEK3P51956 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.49□□□□□ -1.85
NEK3P51956 AL441985.1-201ENST00000457727 251 ntBASIC3.49□□□□□ -1.85
NEK3P51956 RPS27P29-201ENST00000463110 252 ntBASIC3.49□□□□□ -1.85
NEK3P51956 CENPBD1P1-201ENST00000464061 469 ntBASIC3.49□□□□□ -1.85
NEK3P51956 AC008155.2-201ENST00000464337 397 ntBASIC3.49□□□□□ -1.85
NEK3P51956 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.49□□□□□ -1.85
NEK3P51956 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.49□□□□□ -1.85
NEK3P51956 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.49□□□□□ -1.85
NEK3P51956 AC096577.2-201ENST00000611455 153 ntBASIC3.49□□□□□ -1.85
NEK3P51956 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEK3P51956 AC004520.1-201ENST00000608362 1413 ntBASIC3.49□□□□□ -1.85
NEK3P51956 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEK3P51956 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEK3P51956 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
NEK3P51956 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NEK3P51956 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NEK3P51956 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
NEK3P51956 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.48□□□□□ -1.85
NEK3P51956 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
NEK3P51956 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
NEK3P51956 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.48□□□□□ -1.85
NEK3P51956 RNA5SP267-201ENST00000364893 126 ntBASIC3.48□□□□□ -1.85
NEK3P51956 RNU6-748P-201ENST00000384648 107 ntBASIC3.48□□□□□ -1.85
NEK3P51956 MIR514A2-201ENST00000385131 88 ntBASIC3.48□□□□□ -1.85
NEK3P51956 MIR514A3-201ENST00000385132 88 ntBASIC3.48□□□□□ -1.85
NEK3P51956 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.48□□□□□ -1.85
NEK3P51956 CYCSP33-201ENST00000414485 327 ntBASIC3.48□□□□□ -1.85
NEK3P51956 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.48□□□□□ -1.85
NEK3P51956 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.48□□□□□ -1.85
NEK3P51956 HIGD1AP2-201ENST00000446367 280 ntBASIC3.48□□□□□ -1.85
NEK3P51956 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.48□□□□□ -1.85
NEK3P51956 RPL31P41-201ENST00000477967 372 ntBASIC3.48□□□□□ -1.85
NEK3P51956 AC116655.1-201ENST00000508324 901 ntBASIC3.48□□□□□ -1.85
NEK3P51956 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.48□□□□□ -1.85
NEK3P51956 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.48□□□□□ -1.85
NEK3P51956 AC069113.1-201ENST00000517763 267 ntBASIC3.48□□□□□ -1.85
NEK3P51956 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.48□□□□□ -1.85
NEK3P51956 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.48□□□□□ -1.85
NEK3P51956 AC104027.1-201ENST00000521887 300 ntBASIC3.48□□□□□ -1.85
NEK3P51956 CENPUP1-201ENST00000526649 1202 ntBASIC3.48□□□□□ -1.85
NEK3P51956 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.48□□□□□ -1.85
NEK3P51956 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.48□□□□□ -1.85
NEK3P51956 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.48□□□□□ -1.85
NEK3P51956 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.48□□□□□ -1.85
NEK3P51956 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.48□□□□□ -1.85
NEK3P51956 NRBF2P5-201ENST00000603087 788 ntBASIC3.48□□□□□ -1.85
NEK3P51956 AC006557.5-201ENST00000603126 811 ntBASIC3.48□□□□□ -1.85
NEK3P51956 AC091152.3-201ENST00000604227 325 ntBASIC3.48□□□□□ -1.85
NEK3P51956 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NEK3P51956 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.48□□□□□ -1.85
NEK3P51956 AC002064.3-201ENST00000623448 346 ntBASIC3.48□□□□□ -1.85
NEK3P51956 MIR3688-2-201ENST00000636963 87 ntBASIC3.48□□□□□ -1.85
NEK3P51956 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.48□□□□□ -1.85
NEK3P51956 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
NEK3P51956 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.48□□□□□ -1.85
NEK3P51956 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.47□□□□□ -1.85
NEK3P51956 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NEK3P51956 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NEK3P51956 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NEK3P51956 RNU4-66P-201ENST00000365199 138 ntBASIC3.47□□□□□ -1.85
NEK3P51956 RNU1-100P-201ENST00000365255 165 ntBASIC3.47□□□□□ -1.85
NEK3P51956 RNU6-805P-201ENST00000365643 106 ntBASIC3.47□□□□□ -1.85
NEK3P51956 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.47□□□□□ -1.85
NEK3P51956 RNU6-38P-201ENST00000384085 107 ntBASIC3.47□□□□□ -1.85
NEK3P51956 RNU6-19P-201ENST00000384718 107 ntBASIC3.47□□□□□ -1.85
NEK3P51956 MIR548F1-201ENST00000408667 84 ntBASIC3.47□□□□□ -1.85
NEK3P51956 RNA5SP118-201ENST00000410385 109 ntBASIC3.47□□□□□ -1.85
NEK3P51956 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.47□□□□□ -1.85
NEK3P51956 AC092001.1-201ENST00000453012 261 ntBASIC3.47□□□□□ -1.85
NEK3P51956 HMGN1P18-201ENST00000457642 277 ntBASIC3.47□□□□□ -1.85
NEK3P51956 RNU6-333P-201ENST00000459117 107 ntBASIC3.47□□□□□ -1.85
NEK3P51956 MTCO3P38-201ENST00000468910 766 ntBASIC3.47□□□□□ -1.85
NEK3P51956 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.47□□□□□ -1.85
NEK3P51956 FCF1P8-201ENST00000510322 597 ntBASIC3.47□□□□□ -1.85
NEK3P51956 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.47□□□□□ -1.85
NEK3P51956 SCARNA11.3-201ENST00000517276 130 ntBASIC3.47□□□□□ -1.85
NEK3P51956 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.47□□□□□ -1.85
NEK3P51956 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.47□□□□□ -1.85
NEK3P51956 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.47□□□□□ -1.85
NEK3P51956 MTND1P35-201ENST00000526739 508 ntBASIC3.47□□□□□ -1.85
NEK3P51956 CYCSP27-201ENST00000527643 293 ntBASIC3.47□□□□□ -1.85
NEK3P51956 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.47□□□□□ -1.85
NEK3P51956 OR11H5P-201ENST00000554039 926 ntBASIC3.47□□□□□ -1.85
NEK3P51956 AC005951.1-201ENST00000576706 485 ntBASIC3.47□□□□□ -1.85
NEK3P51956 AC020895.1-201ENST00000595362 272 ntBASIC3.47□□□□□ -1.85
NEK3P51956 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.47□□□□□ -1.85
NEK3P51956 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NEK3P51956 MTND4P5-201ENST00000435821 1374 ntBASIC3.47□□□□□ -1.85
NEK3P51956 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NEK3P51956 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms