Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNA5SP196-201ENST00000625967 102 ntBASIC4.65□□□□□ -1.67
USP11P51784 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
USP11P51784 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.65□□□□□ -1.67
USP11P51784 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP11P51784 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.65□□□□□ -1.67
USP11P51784 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
USP11P51784 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
USP11P51784 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.65□□□□□ -1.67
USP11P51784 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP11P51784 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP11P51784 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP11P51784 RPL9P7-201ENST00000330965 580 ntBASIC4.64□□□□□ -1.67
USP11P51784 SNORD113-1-201ENST00000365321 69 ntBASIC4.64□□□□□ -1.67
USP11P51784 RNU1-13P-201ENST00000384499 162 ntBASIC4.64□□□□□ -1.67
USP11P51784 MTND3P9-201ENST00000429526 346 ntBASIC4.64□□□□□ -1.67
USP11P51784 OR4C10P-201ENST00000434991 931 ntBASIC4.64□□□□□ -1.67
USP11P51784 AL513043.1-201ENST00000439124 535 ntBASIC4.64□□□□□ -1.67
USP11P51784 AL136097.1-201ENST00000456945 913 ntBASIC4.64□□□□□ -1.67
USP11P51784 RPL9P9-202ENST00000466501 579 ntBASIC4.64□□□□□ -1.67
USP11P51784 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
USP11P51784 RN7SL271P-201ENST00000487601 295 ntBASIC4.64□□□□□ -1.67
USP11P51784 AC022493.1-201ENST00000492984 337 ntBASIC4.64□□□□□ -1.67
USP11P51784 RPL29P14-201ENST00000495837 428 ntBASIC4.64□□□□□ -1.67
USP11P51784 AC025445.1-201ENST00000502728 300 ntBASIC4.64□□□□□ -1.67
USP11P51784 RNU6-1338P-201ENST00000516328 91 ntBASIC4.64□□□□□ -1.67
USP11P51784 Y_RNA.713-201ENST00000517013 96 ntBASIC4.64□□□□□ -1.67
USP11P51784 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.64□□□□□ -1.67
USP11P51784 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.64□□□□□ -1.67
USP11P51784 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.64□□□□□ -1.67
USP11P51784 AC007458.1-201ENST00000542812 373 ntBASIC4.64□□□□□ -1.67
USP11P51784 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.64□□□□□ -1.67
USP11P51784 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.64□□□□□ -1.67
USP11P51784 MIR5684-201ENST00000585074 65 ntBASIC4.64□□□□□ -1.67
USP11P51784 AC008962.1-201ENST00000605729 304 ntBASIC4.64□□□□□ -1.67
USP11P51784 BX284668.6-201ENST00000606899 438 ntBASIC4.64□□□□□ -1.67
USP11P51784 AC132825.6-201ENST00000638861 357 ntBASIC4.64□□□□□ -1.67
USP11P51784 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP11P51784 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.64□□□□□ -1.67
USP11P51784 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USP11P51784 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USP11P51784 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
USP11P51784 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP11P51784 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USP11P51784 AL592437.2-201ENST00000421655 2434 ntBASIC4.63□□□□□ -1.67
USP11P51784 Y_RNA.27-201ENST00000362540 103 ntBASIC4.63□□□□□ -1.67
USP11P51784 RNA5SP388-201ENST00000362584 119 ntBASIC4.63□□□□□ -1.67
USP11P51784 RNU6-1266P-201ENST00000362794 105 ntBASIC4.63□□□□□ -1.67
USP11P51784 RNU6-933P-201ENST00000384424 107 ntBASIC4.63□□□□□ -1.67
USP11P51784 RNU6-1179P-201ENST00000384667 107 ntBASIC4.63□□□□□ -1.67
USP11P51784 MIR1298-201ENST00000408783 112 ntBASIC4.63□□□□□ -1.67
USP11P51784 RNU2-43P-201ENST00000410306 190 ntBASIC4.63□□□□□ -1.67
USP11P51784 HSPE1P12-201ENST00000412576 301 ntBASIC4.63□□□□□ -1.67
USP11P51784 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.63□□□□□ -1.67
USP11P51784 AL645939.1-201ENST00000453429 797 ntBASIC4.63□□□□□ -1.67
USP11P51784 Y_RNA.644-201ENST00000459006 113 ntBASIC4.63□□□□□ -1.67
USP11P51784 AC008716.1-201ENST00000511084 513 ntBASIC4.63□□□□□ -1.67
USP11P51784 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.63□□□□□ -1.67
USP11P51784 Y_RNA.674-201ENST00000516362 113 ntBASIC4.63□□□□□ -1.67
USP11P51784 CBX3P4-201ENST00000538909 354 ntBASIC4.63□□□□□ -1.67
USP11P51784 AL713866.2-201ENST00000603579 219 ntBASIC4.63□□□□□ -1.67
USP11P51784 AC099669.2-201ENST00000616549 437 ntBASIC4.63□□□□□ -1.67
USP11P51784 RMST_4.1-201ENST00000616886 107 ntBASIC4.63□□□□□ -1.67
USP11P51784 U73479.1-201ENST00000618062 168 ntBASIC4.63□□□□□ -1.67
USP11P51784 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.63□□□□□ -1.67
USP11P51784 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
USP11P51784 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
USP11P51784 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.62□□□□□ -1.67
USP11P51784 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.62□□□□□ -1.67
USP11P51784 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.62□□□□□ -1.67
USP11P51784 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.62□□□□□ -1.67
USP11P51784 RNU6-700P-201ENST00000391043 107 ntBASIC4.62□□□□□ -1.67
USP11P51784 SNORA57.1-201ENST00000391227 145 ntBASIC4.62□□□□□ -1.67
USP11P51784 MRPL35P1-201ENST00000404272 572 ntBASIC4.62□□□□□ -1.67
USP11P51784 RNA5SP239-201ENST00000410218 129 ntBASIC4.62□□□□□ -1.67
USP11P51784 RN7SKP27-201ENST00000410684 333 ntBASIC4.62□□□□□ -1.67
USP11P51784 RNA5SP104-201ENST00000410989 118 ntBASIC4.62□□□□□ -1.67
USP11P51784 EI24P1-201ENST00000416584 867 ntBASIC4.62□□□□□ -1.67
USP11P51784 AL451062.2-201ENST00000427515 271 ntBASIC4.62□□□□□ -1.67
USP11P51784 AL353748.1-201ENST00000440753 474 ntBASIC4.62□□□□□ -1.67
USP11P51784 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USP11P51784 RNU6-1037P-201ENST00000459571 107 ntBASIC4.62□□□□□ -1.67
USP11P51784 AC133134.1-201ENST00000466800 359 ntBASIC4.62□□□□□ -1.67
USP11P51784 AC087190.1-201ENST00000484462 480 ntBASIC4.62□□□□□ -1.67
USP11P51784 AC107032.1-201ENST00000485945 480 ntBASIC4.62□□□□□ -1.67
USP11P51784 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.62□□□□□ -1.67
USP11P51784 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.62□□□□□ -1.67
USP11P51784 HMGN1P11-201ENST00000508668 303 ntBASIC4.62□□□□□ -1.67
USP11P51784 AC107393.1-201ENST00000512403 346 ntBASIC4.62□□□□□ -1.67
USP11P51784 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.62□□□□□ -1.67
USP11P51784 MIR2116-201ENST00000517221 80 ntBASIC4.62□□□□□ -1.67
USP11P51784 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.62□□□□□ -1.67
USP11P51784 AC025627.2-201ENST00000576220 160 ntBASIC4.62□□□□□ -1.67
USP11P51784 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.62□□□□□ -1.67
USP11P51784 MIR4300-201ENST00000581016 96 ntBASIC4.62□□□□□ -1.67
USP11P51784 AC087190.4-201ENST00000574616 8334 ntBASIC4.62□□□□□ -1.67
USP11P51784 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.62□□□□□ -1.67
USP11P51784 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP11P51784 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.62□□□□□ -1.67
USP11P51784 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USP11P51784 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms