Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 snoU109.4-201ENST00000458953 143 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 AC022493.1-201ENST00000492984 337 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.6□□□□□ -1.67
CHRNA4P43681 GSTP1P1-201ENST00000548078 319 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 AC103996.1-201ENST00000555468 102 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 MIR4431-201ENST00000579990 94 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 AC060766.3-201ENST00000591442 263 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.6□□□□□ -1.67
CHRNA4P43681 KLKP1-201ENST00000595979 403 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 SRGNP1-201ENST00000603392 451 ntBASIC4.6□□□□□ -1.67
CHRNA4P43681 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.6□□□□□ -1.67
CHRNA4P43681 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHRNA4P43681 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CHRNA4P43681 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHRNA4P43681 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.6□□□□□ -1.67
CHRNA4P43681 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
CHRNA4P43681 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHRNA4P43681 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.59□□□□□ -1.67
CHRNA4P43681 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.59□□□□□ -1.67
CHRNA4P43681 RNU6-227P-201ENST00000362865 103 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 Y_RNA.123-201ENST00000363338 102 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 RNU4-9P-201ENST00000364951 139 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 RNU6-1175P-201ENST00000365200 107 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 MIR921-201ENST00000401133 56 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 RN7SKP167-201ENST00000411047 285 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 AC016397.1-201ENST00000412463 242 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.59□□□□□ -1.67
CHRNA4P43681 RPL31P2-201ENST00000413849 377 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.59□□□□□ -1.67
CHRNA4P43681 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.59□□□□□ -1.67
CHRNA4P43681 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.59□□□□□ -1.67
CHRNA4P43681 RPL30P3-201ENST00000424262 333 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 AP000907.1-201ENST00000428428 510 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.59□□□□□ -1.67
CHRNA4P43681 HMGB1P27-201ENST00000431429 603 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.59□□□□□ -1.67
CHRNA4P43681 MTATP6P7-201ENST00000453315 681 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.59□□□□□ -1.67
CHRNA4P43681 NIP7P2-201ENST00000485801 544 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.59□□□□□ -1.67
CHRNA4P43681 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.59□□□□□ -1.67
CHRNA4P43681 RNU5E-3P-201ENST00000515913 68 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 RNU6-567P-201ENST00000516746 107 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 IGLVIV-53-201ENST00000520107 367 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.59□□□□□ -1.67
CHRNA4P43681 AP001781.1-201ENST00000530977 207 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 RN7SL690P-201ENST00000582087 240 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 AC091178.1-203ENST00000584586 279 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 AC123786.2-201ENST00000603459 275 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 AC011603.4-201ENST00000611325 277 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 MIR6864-201ENST00000617935 70 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 AC006001.4-201ENST00000622243 395 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 MIR3658-201ENST00000636291 56 ntBASIC4.59□□□□□ -1.67
CHRNA4P43681 LINC01355-201ENST00000566551 5444 ntBASIC4.59□□□□□ -1.68
CHRNA4P43681 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.68
CHRNA4P43681 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.59□□□□□ -1.68
CHRNA4P43681 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.59□□□□□ -1.68
CHRNA4P43681 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHRNA4P43681 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CHRNA4P43681 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CHRNA4P43681 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHRNA4P43681 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CHRNA4P43681 RNU6-626P-201ENST00000363354 107 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 Y_RNA.172-201ENST00000363765 102 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 RNU6-741P-201ENST00000383889 107 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 SNORA70F-201ENST00000384142 135 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 RNU6-17P-201ENST00000384245 107 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 RNU6-18P-201ENST00000384527 107 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 RNU6-376P-201ENST00000384731 106 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 MIR141-201ENST00000384975 95 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CHRNA4P43681 RNA5SP397-201ENST00000391323 118 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 RNU2-50P-201ENST00000410494 143 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 ELOCP19-201ENST00000411919 318 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.58□□□□□ -1.68
CHRNA4P43681 RPS12P10-201ENST00000427031 377 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 RPS20P1-201ENST00000434853 354 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.58□□□□□ -1.68
CHRNA4P43681 AC009220.1-201ENST00000451614 275 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 RPL23AP3-201ENST00000453844 468 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.58□□□□□ -1.68
CHRNA4P43681 RPS15AP34-201ENST00000487776 387 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 SUMO2P6-201ENST00000505273 288 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 AC107027.2-201ENST00000512197 115 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 RNA5SP464-201ENST00000516251 108 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 RNA5SP76-201ENST00000516277 87 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 TRAV37-201ENST00000553906 342 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 MIR4697-201ENST00000582977 78 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.58□□□□□ -1.68
CHRNA4P43681 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.58□□□□□ -1.68
CHRNA4P43681 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHRNA4P43681 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHRNA4P43681 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CHRNA4P43681 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.58□□□□□ -1.68
CHRNA4P43681 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.58□□□□□ -1.68
CHRNA4P43681 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHRNA4P43681 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.57□□□□□ -1.68
CHRNA4P43681 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHRNA4P43681 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CHRNA4P43681 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms