Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC078974.1-201ENST00000411597 223 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.86□□□□□ -2.11
RFC3P40938 RPL7P34-201ENST00000433316 712 ntBASIC1.86□□□□□ -2.11
RFC3P40938 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RFC3P40938 RNU6-953P-201ENST00000459154 107 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AC117503.1-201ENST00000472241 394 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AC108210.2-201ENST00000503681 201 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.86□□□□□ -2.11
RFC3P40938 MTND4P2-201ENST00000507767 1203 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AC116655.1-201ENST00000508324 901 ntBASIC1.86□□□□□ -2.11
RFC3P40938 ACA59.2-201ENST00000517061 156 ntBASIC1.86□□□□□ -2.11
RFC3P40938 SNORA31.25-201ENST00000517242 134 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AC009902.1-201ENST00000519351 183 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.86□□□□□ -2.11
RFC3P40938 AC012213.3-201ENST00000577199 777 ntBASIC1.86□□□□□ -2.11
RFC3P40938 MIR4782-201ENST00000577987 79 ntBASIC1.86□□□□□ -2.11
RFC3P40938 MIR3935-201ENST00000583472 104 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AL670379.6-201ENST00000603753 252 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AL670379.11-201ENST00000604059 253 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AC008162.1-201ENST00000604718 254 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AC007363.1-201ENST00000604736 620 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AL670379.1-201ENST00000604752 252 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AL670379.5-201ENST00000605253 252 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AL670379.12-201ENST00000605291 253 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AL670379.8-201ENST00000605353 252 ntBASIC1.86□□□□□ -2.11
RFC3P40938 AL670379.7-201ENST00000605823 252 ntBASIC1.86□□□□□ -2.11
RFC3P40938 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RFC3P40938 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.85□□□□□ -2.11
RFC3P40938 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
RFC3P40938 MIR620-201ENST00000385232 95 ntBASIC1.85□□□□□ -2.11
RFC3P40938 SNORA48.3-201ENST00000391081 134 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.85□□□□□ -2.11
RFC3P40938 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.85□□□□□ -2.11
RFC3P40938 RPS12P24-201ENST00000412619 387 ntBASIC1.85□□□□□ -2.11
RFC3P40938 MTATP6P19-201ENST00000413797 659 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.85□□□□□ -2.11
RFC3P40938 RAC1P6-201ENST00000423911 575 ntBASIC1.85□□□□□ -2.11
RFC3P40938 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.85□□□□□ -2.11
RFC3P40938 RPS15AP9-201ENST00000439856 381 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AL591719.1-201ENST00000444669 744 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.85□□□□□ -2.11
RFC3P40938 RPL7P12-201ENST00000446719 750 ntBASIC1.85□□□□□ -2.11
RFC3P40938 RPL23AP7-203ENST00000449021 469 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.85□□□□□ -2.11
RFC3P40938 snoU13.23-201ENST00000458863 104 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AC109486.1-201ENST00000486833 374 ntBASIC1.85□□□□□ -2.11
RFC3P40938 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.85□□□□□ -2.11
RFC3P40938 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
RFC3P40938 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
RFC3P40938 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
RFC3P40938 AC079598.5-201ENST00000547460 117 ntBASIC1.85□□□□□ -2.11
RFC3P40938 OR11H5P-201ENST00000554039 926 ntBASIC1.85□□□□□ -2.11
RFC3P40938 DUXAP1-201ENST00000556632 463 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AC015712.3-201ENST00000559380 164 ntBASIC1.85□□□□□ -2.11
RFC3P40938 LINC00933-203ENST00000559812 219 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AC012435.1-202ENST00000568772 240 ntBASIC1.85□□□□□ -2.11
RFC3P40938 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.85□□□□□ -2.11
RFC3P40938 KC877982.1-201ENST00000602313 470 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AC106052.1-201ENST00000608029 497 ntBASIC1.85□□□□□ -2.11
RFC3P40938 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.85□□□□□ -2.11
RFC3P40938 MIR5739-201ENST00000619803 80 ntBASIC1.85□□□□□ -2.11
RFC3P40938 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
RFC3P40938 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RFC3P40938 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.84□□□□□ -2.11
RFC3P40938 RNU1-72P-201ENST00000362976 153 ntBASIC1.84□□□□□ -2.11
RFC3P40938 RNU6-931P-201ENST00000363850 107 ntBASIC1.84□□□□□ -2.11
RFC3P40938 RNU6-1280P-201ENST00000365211 107 ntBASIC1.84□□□□□ -2.11
RFC3P40938 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RFC3P40938 MIR1302-8-201ENST00000408342 128 ntBASIC1.84□□□□□ -2.11
RFC3P40938 MTND4P25-201ENST00000441039 533 ntBASIC1.84□□□□□ -2.11
RFC3P40938 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.84□□□□□ -2.11
RFC3P40938 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.84□□□□□ -2.11
RFC3P40938 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.84□□□□□ -2.11
RFC3P40938 SNORD97-201ENST00000459187 142 ntBASIC1.84□□□□□ -2.11
RFC3P40938 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.84□□□□□ -2.11
RFC3P40938 AC055731.1-201ENST00000474387 401 ntBASIC1.84□□□□□ -2.11
RFC3P40938 AC004263.1-201ENST00000479327 332 ntBASIC1.84□□□□□ -2.11
RFC3P40938 AC023194.1-201ENST00000493084 308 ntBASIC1.84□□□□□ -2.11
RFC3P40938 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.84□□□□□ -2.11
RFC3P40938 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.84□□□□□ -2.11
RFC3P40938 RNU6-572P-201ENST00000516724 80 ntBASIC1.84□□□□□ -2.11
RFC3P40938 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.84□□□□□ -2.11
RFC3P40938 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.84□□□□□ -2.11
RFC3P40938 AL356432.3-201ENST00000568952 465 ntBASIC1.84□□□□□ -2.11
RFC3P40938 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
RFC3P40938 AC034229.4-201ENST00000607861 441 ntBASIC1.84□□□□□ -2.11
RFC3P40938 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.84□□□□□ -2.11
RFC3P40938 AP001486.3-201ENST00000615334 372 ntBASIC1.84□□□□□ -2.11
RFC3P40938 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.84□□□□□ -2.11
RFC3P40938 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.84□□□□□ -2.11
RFC3P40938 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.84□□□□□ -2.11
RFC3P40938 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.84□□□□□ -2.12
RFC3P40938 AC131280.1-202ENST00000624067 4211 ntBASIC1.84□□□□□ -2.12
RFC3P40938 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.12
RFC3P40938 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
RFC3P40938 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
RFC3P40938 AL354685.2-201ENST00000448218 1447 ntBASIC1.83□□□□□ -2.12
RFC3P40938 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.83□□□□□ -2.12
RFC3P40938 RNU6-288P-201ENST00000363690 104 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms