Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC004852.3-201ENST00000614131 326 ntBASIC4.05□□□□□ -1.76
LTBRP36941 U4.1-201ENST00000620349 87 ntBASIC4.05□□□□□ -1.76
LTBRP36941 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.05□□□□□ -1.76
LTBRP36941 SCARNA15.3-201ENST00000626315 122 ntBASIC4.05□□□□□ -1.76
LTBRP36941 SCARNA4.1-201ENST00000628597 123 ntBASIC4.05□□□□□ -1.76
LTBRP36941 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LTBRP36941 AC087190.4-201ENST00000574616 8334 ntBASIC4.05□□□□□ -1.76
LTBRP36941 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.05□□□□□ -1.76
LTBRP36941 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LTBRP36941 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LTBRP36941 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
LTBRP36941 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
LTBRP36941 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LTBRP36941 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LTBRP36941 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LTBRP36941 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LTBRP36941 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LTBRP36941 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.04□□□□□ -1.76
LTBRP36941 Y_RNA.193-201ENST00000363979 102 ntBASIC4.04□□□□□ -1.76
LTBRP36941 RNA5SP189-201ENST00000364920 115 ntBASIC4.04□□□□□ -1.76
LTBRP36941 MIR128-1-201ENST00000384921 82 ntBASIC4.04□□□□□ -1.76
LTBRP36941 MIR325-201ENST00000385260 98 ntBASIC4.04□□□□□ -1.76
LTBRP36941 RNU6-823P-201ENST00000391042 103 ntBASIC4.04□□□□□ -1.76
LTBRP36941 AL591034.2-201ENST00000402839 359 ntBASIC4.04□□□□□ -1.76
LTBRP36941 RNU6-1156P-201ENST00000410365 100 ntBASIC4.04□□□□□ -1.76
LTBRP36941 RPL36AP10-201ENST00000421785 322 ntBASIC4.04□□□□□ -1.76
LTBRP36941 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.04□□□□□ -1.76
LTBRP36941 NUP35P1-201ENST00000422734 947 ntBASIC4.04□□□□□ -1.76
LTBRP36941 SNRPEP9-201ENST00000436794 238 ntBASIC4.04□□□□□ -1.76
LTBRP36941 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.04□□□□□ -1.76
LTBRP36941 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.04□□□□□ -1.76
LTBRP36941 AC112492.4-201ENST00000456549 352 ntBASIC4.04□□□□□ -1.76
LTBRP36941 U8.20-201ENST00000459445 131 ntBASIC4.04□□□□□ -1.76
LTBRP36941 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.04□□□□□ -1.76
LTBRP36941 RPL31P13-201ENST00000484151 370 ntBASIC4.04□□□□□ -1.76
LTBRP36941 AC110794.1-201ENST00000505816 425 ntBASIC4.04□□□□□ -1.76
LTBRP36941 AK3P2-201ENST00000507976 429 ntBASIC4.04□□□□□ -1.76
LTBRP36941 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.04□□□□□ -1.76
LTBRP36941 AC109479.2-201ENST00000517842 174 ntBASIC4.04□□□□□ -1.76
LTBRP36941 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.04□□□□□ -1.76
LTBRP36941 AL161670.1-201ENST00000554348 137 ntBASIC4.04□□□□□ -1.76
LTBRP36941 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.04□□□□□ -1.76
LTBRP36941 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.04□□□□□ -1.76
LTBRP36941 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.04□□□□□ -1.76
LTBRP36941 AC005086.4-201ENST00000623065 213 ntBASIC4.04□□□□□ -1.76
LTBRP36941 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.04□□□□□ -1.76
LTBRP36941 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LTBRP36941 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LTBRP36941 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LTBRP36941 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LTBRP36941 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.04□□□□□ -1.76
LTBRP36941 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.04□□□□□ -1.76
LTBRP36941 USP8P1-201ENST00000494673 3183 ntBASIC4.04□□□□□ -1.76
LTBRP36941 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.04□□□□□ -1.76
LTBRP36941 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
LTBRP36941 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 RNU6-238P-201ENST00000363313 106 ntBASIC4.03□□□□□ -1.76
LTBRP36941 RNA5SP167-201ENST00000365461 116 ntBASIC4.03□□□□□ -1.76
LTBRP36941 SET-203ENST00000372688 801 ntTSL 2 BASIC4.03□□□□□ -1.76
LTBRP36941 Y_RNA.533-201ENST00000384596 114 ntBASIC4.03□□□□□ -1.76
LTBRP36941 Y_RNA.574-201ENST00000384766 95 ntBASIC4.03□□□□□ -1.76
LTBRP36941 RNU6-1197P-201ENST00000391183 107 ntBASIC4.03□□□□□ -1.76
LTBRP36941 AL138885.1-201ENST00000405921 675 ntBASIC4.03□□□□□ -1.76
LTBRP36941 AC098614.2-201ENST00000426040 255 ntBASIC4.03□□□□□ -1.76
LTBRP36941 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 AC083863.1-201ENST00000438811 231 ntBASIC4.03□□□□□ -1.76
LTBRP36941 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 AL645939.1-201ENST00000453429 797 ntBASIC4.03□□□□□ -1.76
LTBRP36941 AC008155.2-201ENST00000464337 397 ntBASIC4.03□□□□□ -1.76
LTBRP36941 RN7SL601P-201ENST00000471221 293 ntBASIC4.03□□□□□ -1.76
LTBRP36941 S100A11P1-201ENST00000477525 312 ntBASIC4.03□□□□□ -1.76
LTBRP36941 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 AC023141.12-201ENST00000512399 199 ntBASIC4.03□□□□□ -1.76
LTBRP36941 RN7SKP46-201ENST00000515942 234 ntBASIC4.03□□□□□ -1.76
LTBRP36941 Y_RNA.687-201ENST00000516558 91 ntBASIC4.03□□□□□ -1.76
LTBRP36941 AC022695.1-201ENST00000522089 237 ntBASIC4.03□□□□□ -1.76
LTBRP36941 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.03□□□□□ -1.76
LTBRP36941 AL158827.2-201ENST00000602494 330 ntBASIC4.03□□□□□ -1.76
LTBRP36941 PRR13P7-201ENST00000605538 430 ntBASIC4.03□□□□□ -1.76
LTBRP36941 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.03□□□□□ -1.76
LTBRP36941 AL691447.3-201ENST00000635020 330 ntBASIC4.03□□□□□ -1.76
LTBRP36941 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.03□□□□□ -1.76
LTBRP36941 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 AC018529.3-201ENST00000624212 2254 ntBASIC4.03□□□□□ -1.76
LTBRP36941 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
LTBRP36941 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LTBRP36941 AC010733.2-201ENST00000589496 5702 ntBASIC4.03□□□□□ -1.76
LTBRP36941 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.03□□□□□ -1.76
LTBRP36941 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.03□□□□□ -1.77
LTBRP36941 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LTBRP36941 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.02□□□□□ -1.77
LTBRP36941 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LTBRP36941 MAPK10-303ENST00000641324 3959 ntBASIC4.02□□□□□ -1.77
LTBRP36941 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.02□□□□□ -1.77
LTBRP36941 AC008669.1-201ENST00000565823 2178 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms