Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 Y_RNA.22-201ENST00000362492 102 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 Y_RNA.296-201ENST00000364930 108 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 Y_RNA.359-201ENST00000365498 102 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 RNU6-395P-201ENST00000365662 106 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.12□□□□□ -1.91
TM4SF1P30408 RNU6-1119P-201ENST00000384349 108 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 AL512633.1-201ENST00000399931 655 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.12□□□□□ -1.91
TM4SF1P30408 RNA5SP111-201ENST00000411386 101 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.12□□□□□ -1.91
TM4SF1P30408 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.12□□□□□ -1.91
TM4SF1P30408 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.12□□□□□ -1.91
TM4SF1P30408 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.12□□□□□ -1.91
TM4SF1P30408 CACYBPP2-201ENST00000453625 678 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.12□□□□□ -1.91
TM4SF1P30408 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.12□□□□□ -1.91
TM4SF1P30408 RPS27P26-201ENST00000494583 239 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 SUMO2P6-201ENST00000505273 288 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 AC234781.5-201ENST00000508429 271 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.12□□□□□ -1.91
TM4SF1P30408 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.12□□□□□ -1.91
TM4SF1P30408 AC084851.1-201ENST00000529105 249 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 OR5B19P-201ENST00000531766 928 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.12□□□□□ -1.91
TM4SF1P30408 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.12□□□□□ -1.91
TM4SF1P30408 AL157871.3-201ENST00000557231 293 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.12□□□□□ -1.91
TM4SF1P30408 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.12□□□□□ -1.91
TM4SF1P30408 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.12□□□□□ -1.91
TM4SF1P30408 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.12□□□□□ -1.91
TM4SF1P30408 Z84480.1-201ENST00000605131 311 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 AC098614.4-201ENST00000607601 462 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.12□□□□□ -1.91
TM4SF1P30408 AC046143.2-201ENST00000609789 160 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 AC099842.1-201ENST00000619919 596 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TM4SF1P30408 MIR3199-2-201ENST00000636243 86 ntBASIC3.12□□□□□ -1.91
TM4SF1P30408 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.12□□□□□ -1.91
TM4SF1P30408 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.12□□□□□ -1.91
TM4SF1P30408 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TM4SF1P30408 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TM4SF1P30408 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TM4SF1P30408 ADAM3A-203ENST00000461344 2157 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TM4SF1P30408 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TM4SF1P30408 MTND5P6-201ENST00000422338 1798 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 SNORA24.1-201ENST00000384401 135 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TM4SF1P30408 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TM4SF1P30408 AC092809.3-201ENST00000415453 231 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.11□□□□□ -1.91
TM4SF1P30408 TRIAP1P1-201ENST00000427062 225 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 AL358934.1-201ENST00000432346 324 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.11□□□□□ -1.91
TM4SF1P30408 AC079448.1-201ENST00000449377 373 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 RPL23AP14-201ENST00000468281 468 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.11□□□□□ -1.91
TM4SF1P30408 AC109927.2-201ENST00000506416 303 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 MTCO3P7-201ENST00000510008 774 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 MTND3P5-201ENST00000512798 333 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.11□□□□□ -1.91
TM4SF1P30408 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.11□□□□□ -1.91
TM4SF1P30408 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.11□□□□□ -1.91
TM4SF1P30408 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.11□□□□□ -1.91
TM4SF1P30408 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.11□□□□□ -1.91
TM4SF1P30408 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.11□□□□□ -1.91
TM4SF1P30408 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.11□□□□□ -1.91
TM4SF1P30408 SUB1P2-201ENST00000556401 297 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.11□□□□□ -1.91
TM4SF1P30408 AC005951.1-201ENST00000576706 485 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 MIR4782-201ENST00000577987 79 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
TM4SF1P30408 AP005136.1-201ENST00000579765 429 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.11□□□□□ -1.91
TM4SF1P30408 AL121992.2-201ENST00000606262 256 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 MIR15A-201ENST00000607334 83 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 AL157786.1-207ENST00000627771 695 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 AC016717.2-201ENST00000609089 5141 ntBASIC3.11□□□□□ -1.91
TM4SF1P30408 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TM4SF1P30408 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
TM4SF1P30408 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TM4SF1P30408 Y_RNA.33-201ENST00000362591 102 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 SNORD114-1-201ENST00000362705 72 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 RNU6-181P-201ENST00000363225 107 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 Y_RNA.367-201ENST00000365544 101 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 Y_RNA.534-201ENST00000384599 112 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 AC098614.2-201ENST00000426040 255 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 AL358075.3-201ENST00000426289 226 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
TM4SF1P30408 AL365496.1-201ENST00000426885 215 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 AC073464.1-201ENST00000429823 534 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.1□□□□□ -1.91
TM4SF1P30408 AC098831.1-201ENST00000440661 216 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 RPS15AP27-201ENST00000449183 343 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.1□□□□□ -1.91
TM4SF1P30408 RNU7-182P-201ENST00000459009 62 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 RPS27P29-201ENST00000463110 252 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 RPS27AP10-201ENST00000496103 208 ntBASIC3.1□□□□□ -1.91
TM4SF1P30408 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms