Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RPL17P35-201ENST00000432217 549 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AL591212.2-201ENST00000433923 257 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
COL4A5P29400 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A5P29400 COX6CP18-201ENST00000448769 222 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 snoU13.8-201ENST00000458890 104 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.26□□□□□ -2.21
COL4A5P29400 MIR514B-201ENST00000516774 80 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC092451.2-201ENST00000538746 658 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AGGF1P5-201ENST00000567900 919 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 MIR4529-201ENST00000578110 78 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC135507.1-201ENST00000607214 561 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC097460.3-201ENST00000623099 442 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 AC109454.4-201ENST00000623411 649 ntBASIC1.26□□□□□ -2.21
COL4A5P29400 RNU6-884P-201ENST00000363889 107 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
COL4A5P29400 RNU6-1083P-201ENST00000384022 107 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 U6atac.2-201ENST00000408644 118 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 RPS15AP5-201ENST00000436276 388 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AC004383.1-201ENST00000438135 289 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AC093155.1-201ENST00000440164 826 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.25□□□□□ -2.21
COL4A5P29400 MTATP6P7-201ENST00000453315 681 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AC026801.1-201ENST00000497178 464 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A5P29400 AC125611.1-201ENST00000549563 229 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AL132857.1-201ENST00000555180 708 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.25□□□□□ -2.21
COL4A5P29400 MIR4714-201ENST00000580728 77 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 UBE2L4-201ENST00000587688 464 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AC069294.1-201ENST00000608397 350 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.25□□□□□ -2.21
COL4A5P29400 AC024257.5-201ENST00000612739 531 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 AL596245.1-201ENST00000618994 362 ntBASIC1.25□□□□□ -2.21
COL4A5P29400 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COL4A5P29400 AL589826.1-201ENST00000340697 249 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 SNORA3A-201ENST00000364113 130 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 NDUFS5P4-201ENST00000412983 318 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 AC092634.6-201ENST00000418558 192 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.24□□□□□ -2.21
COL4A5P29400 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.24□□□□□ -2.21
COL4A5P29400 PGBD4P6-201ENST00000421501 610 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 DPRXP1-201ENST00000426312 460 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 SEPT7P5-201ENST00000434048 306 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 RNA5SP233-201ENST00000459153 113 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 RPL22P13-201ENST00000493291 347 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 MIR3912-201ENST00000577566 105 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 MIR4765-201ENST00000585007 77 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.24□□□□□ -2.21
COL4A5P29400 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.24□□□□□ -2.21
COL4A5P29400 MIR5739-201ENST00000619803 80 ntBASIC1.24□□□□□ -2.21
COL4A5P29400 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.24□□□□□ -2.21
COL4A5P29400 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
COL4A5P29400 RAC1P8-201ENST00000427086 527 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 FTH1P12-201ENST00000432137 551 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 FABP5P14-201ENST00000437273 393 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 RPS23P4-201ENST00000487908 423 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A5P29400 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A5P29400 RNA5SP121-201ENST00000516537 101 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 RNA5SP290-201ENST00000517133 127 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 RNU6-840P-201ENST00000517275 65 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.23□□□□□ -2.21
COL4A5P29400 CYB5AP5-201ENST00000549779 389 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC138915.2-201ENST00000569776 97 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 MIR3126-201ENST00000577443 74 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 MIR4287-201ENST00000579398 78 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC008121.1-201ENST00000603244 268 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AL445435.1-201ENST00000604232 665 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AL450336.1-201ENST00000605180 586 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC068276.1-201ENST00000605793 379 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC007038.2-201ENST00000608095 740 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC010133.1-201ENST00000615809 842 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC080100.1-201ENST00000624239 5356 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
COL4A5P29400 SNORA62.1-201ENST00000364287 154 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 Y_RNA.245-201ENST00000364493 95 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 RNU6-637P-201ENST00000384050 107 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A5P29400 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.23□□□□□ -2.21
COL4A5P29400 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A5P29400 AC007919.1-201ENST00000429380 217 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 NEFMP1-201ENST00000443423 1006 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 MTND2P3-201ENST00000452458 470 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A5P29400 AC107626.1-201ENST00000471084 183 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A5P29400 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A5P29400 COL6A4P2-205ENST00000509855 506 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AF213884.2-201ENST00000510417 903 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A5P29400 DEFB108E-201ENST00000524692 240 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A5P29400 AC025588.2-201ENST00000604851 466 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AL139344.1-201ENST00000605228 195 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.23□□□□□ -2.21
COL4A5P29400 AP005229.2-201ENST00000609980 697 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC090970.3-201ENST00000612566 866 ntBASIC1.23□□□□□ -2.21
COL4A5P29400 AC007742.2-201ENST00000618226 398 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms