Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 MTND3P10-201ENST00000450967 341 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 RPL21P41-201ENST00000459863 264 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 AC006445.1-201ENST00000491925 405 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.15□□□□□ -1.91
CTPS1P17812 AC010265.1-201ENST00000513509 211 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 SNORA20.3-201ENST00000516880 132 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.15□□□□□ -1.91
CTPS1P17812 AP003122.3-201ENST00000526316 255 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 PSMA2P1-201ENST00000526365 646 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 AC084851.1-201ENST00000529105 249 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.15□□□□□ -1.91
CTPS1P17812 AL121579.1-201ENST00000555129 305 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.15□□□□□ -1.91
CTPS1P17812 AL157871.3-201ENST00000557231 293 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 MIR5004-201ENST00000579078 107 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.15□□□□□ -1.91
CTPS1P17812 MIR548AC-201ENST00000585049 88 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 AC012493.2-201ENST00000595083 291 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.15□□□□□ -1.91
CTPS1P17812 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.15□□□□□ -1.91
CTPS1P17812 AL591516.1-201ENST00000611326 274 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 AP003122.6-201ENST00000623831 495 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.15□□□□□ -1.91
CTPS1P17812 AC100810.6-201ENST00000638068 285 ntBASIC3.15□□□□□ -1.91
CTPS1P17812 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTPS1P17812 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTPS1P17812 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTPS1P17812 FAM35BP-202ENST00000497389 3337 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CTPS1P17812 AL359693.1-201ENST00000614959 2407 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTPS1P17812 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTPS1P17812 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTPS1P17812 RNU6-1035P-201ENST00000384477 107 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 RNU6-140P-201ENST00000384566 108 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CTPS1P17812 SNORD70.1-201ENST00000391007 85 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 RNU6-332P-201ENST00000391193 108 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.14□□□□□ -1.91
CTPS1P17812 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.14□□□□□ -1.91
CTPS1P17812 NDUFB4P5-201ENST00000415445 361 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.14□□□□□ -1.91
CTPS1P17812 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.14□□□□□ -1.91
CTPS1P17812 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.14□□□□□ -1.91
CTPS1P17812 RPS3AP12-201ENST00000443616 753 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 AL671855.1-201ENST00000446875 1203 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.14□□□□□ -1.91
CTPS1P17812 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.14□□□□□ -1.91
CTPS1P17812 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.14□□□□□ -1.91
CTPS1P17812 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.14□□□□□ -1.91
CTPS1P17812 LRRC34P2-201ENST00000514850 553 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 RNU6-1038P-201ENST00000516516 104 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 RNA5SP165-201ENST00000517142 115 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 CENPUP1-201ENST00000526649 1202 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.14□□□□□ -1.91
CTPS1P17812 AL118558.2-201ENST00000556294 238 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.14□□□□□ -1.91
CTPS1P17812 AC099506.2-201ENST00000623074 221 ntBASIC3.14□□□□□ -1.91
CTPS1P17812 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTPS1P17812 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTPS1P17812 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTPS1P17812 RNU6-395P-201ENST00000365662 106 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 RNU6-217P-201ENST00000384164 104 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 SNORA7.4-201ENST00000384249 137 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 RNU6-393P-201ENST00000384475 107 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 RNU4-26P-201ENST00000410270 107 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 Y_RNA.604-201ENST00000410574 102 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 AC009161.1-201ENST00000417306 376 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 RPL21P111-201ENST00000418453 477 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 AL669831.1-202ENST00000428504 417 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 RPL21P40-201ENST00000428586 483 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 SNRPEP9-201ENST00000436794 238 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 GTF2IP13-201ENST00000438487 386 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.13□□□□□ -1.91
CTPS1P17812 snoU13.28-201ENST00000459235 104 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.13□□□□□ -1.91
CTPS1P17812 AC009901.1-201ENST00000506703 541 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.13□□□□□ -1.91
CTPS1P17812 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.13□□□□□ -1.91
CTPS1P17812 RNA5SP217-201ENST00000515959 91 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.13□□□□□ -1.91
CTPS1P17812 MIR1273C-201ENST00000578669 77 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 MIR5692A1-201ENST00000580523 69 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.13□□□□□ -1.91
CTPS1P17812 AC018638.8-201ENST00000588755 281 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 AC004805.2-201ENST00000605382 482 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 MIR8057-201ENST00000620957 69 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 AC090617.10-201ENST00000624308 134 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 AP003400.5-201ENST00000624827 617 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 AL008636.1-201ENST00000625038 1018 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTPS1P17812 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
CTPS1P17812 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.13□□□□□ -1.91
CTPS1P17812 AC022336.2-201ENST00000568966 2538 ntBASIC3.13□□□□□ -1.91
CTPS1P17812 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTPS1P17812 AC233263.6-201ENST00000631132 1963 ntBASIC3.12□□□□□ -1.91
CTPS1P17812 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTPS1P17812 FTLP6-201ENST00000355274 422 ntBASIC3.12□□□□□ -1.91
CTPS1P17812 Y_RNA.33-201ENST00000362591 102 ntBASIC3.12□□□□□ -1.91
CTPS1P17812 Y_RNA.72-201ENST00000362894 103 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms