Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 ARL2BPP3-201ENST00000421226 480 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 RSU1P2-202ENST00000437884 485 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.38□□□□□ -2.35
COL6A3P12111 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.38□□□□□ -2.35
COL6A3P12111 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.38□□□□□ -2.35
COL6A3P12111 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.38□□□□□ -2.35
COL6A3P12111 RNU6-45P-201ENST00000384471 107 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 MIR92A1-201ENST00000385233 78 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 RNU4-65P-201ENST00000410473 140 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 UBE2V2P3-201ENST00000433562 437 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 NF1P3-201ENST00000457709 450 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 AC067940.1-201ENST00000458411 300 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 AC139453.3-201ENST00000493276 369 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.38□□□□□ -2.35
COL6A3P12111 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.38□□□□□ -2.35
COL6A3P12111 AC008759.3-201ENST00000613300 508 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 AL121890.5-201ENST00000620848 304 ntBASIC0.38□□□□□ -2.35
COL6A3P12111 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.38□□□□□ -2.35
COL6A3P12111 MIR214-201ENST00000385214 110 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 MTATP6P23-201ENST00000440153 476 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 PRELID3BP1-201ENST00000457142 540 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 RPL23AP54-201ENST00000495129 419 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.37□□□□□ -2.35
COL6A3P12111 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.37□□□□□ -2.35
COL6A3P12111 ERHP1-201ENST00000523006 310 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC087272.1-201ENST00000523624 533 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC023824.2-201ENST00000566185 400 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC015849.6-201ENST00000605454 474 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC019131.2-201ENST00000609071 870 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 RNU6-674P-201ENST00000363831 107 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 RNU4-9P-201ENST00000364951 139 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.37□□□□□ -2.35
COL6A3P12111 AC092634.6-201ENST00000418558 192 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AL606495.1-201ENST00000422100 813 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 NDUFB4P7-201ENST00000423198 363 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AL049830.1-201ENST00000468034 425 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 OR2A41P-201ENST00000473586 105 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 NCOR1P1-202ENST00000486162 291 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 HMGB1P38-201ENST00000490557 577 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.37□□□□□ -2.35
COL6A3P12111 EIF4EP3-201ENST00000498782 656 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 RNU6-1073P-201ENST00000517182 106 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 EIF4EP5-201ENST00000528228 640 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 OR5AL2P-201ENST00000532185 920 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC074051.3-201ENST00000570238 358 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC004241.3-201ENST00000611728 517 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC091912.2-201ENST00000624798 167 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC005592.1-201ENST00000566527 1640 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AP001350.1-201ENST00000601906 1524 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 SNORA38-201ENST00000363946 132 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 RPL21P66-201ENST00000426566 466 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC0.37□□□□□ -2.35
COL6A3P12111 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.37□□□□□ -2.35
COL6A3P12111 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.37□□□□□ -2.35
COL6A3P12111 OR10V3P-201ENST00000525712 725 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AC034236.3-201ENST00000605999 461 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.37□□□□□ -2.35
COL6A3P12111 AC011155.2-201ENST00000623202 216 ntBASIC0.37□□□□□ -2.35
COL6A3P12111 Y_RNA.180-201ENST00000363867 113 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 RN7SKP158-201ENST00000410453 326 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 RNU6-1077P-201ENST00000410506 102 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 CYCTP-201ENST00000504253 315 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 AC112518.2-201ENST00000508565 425 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 MED28P6-201ENST00000558776 231 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 AL138478.1-201ENST00000612252 832 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 AL138726.1-201ENST00000614873 333 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 AP003476.1-201ENST00000623984 516 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.36□□□□□ -2.35
COL6A3P12111 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.36□□□□□ -2.35
COL6A3P12111 AC245047.4-201ENST00000433189 144 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 OSTCP8-201ENST00000445117 448 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.36□□□□□ -2.35
COL6A3P12111 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.36□□□□□ -2.35
COL6A3P12111 TPMTP4-201ENST00000450749 678 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 CABYRP1-201ENST00000465493 1045 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.36□□□□□ -2.35
COL6A3P12111 MIR6130-201ENST00000619419 109 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.36□□□□□ -2.35
COL6A3P12111 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
COL6A3P12111 AC134026.1-201ENST00000623249 2239 ntBASIC0.36□□□□□ -2.35
COL6A3P12111 Y_RNA.231-201ENST00000364358 102 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.35□□□□□ -2.35
COL6A3P12111 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.35□□□□□ -2.35
COL6A3P12111 AC012254.4-201ENST00000588843 273 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 PRR13P7-201ENST00000605538 430 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
COL6A3P12111 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
COL6A3P12111 RNA5SP451-201ENST00000410588 110 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 RNU4-63P-201ENST00000411313 118 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 PDCL2P1-201ENST00000419302 352 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 AL513343.1-201ENST00000451818 792 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 AC078857.1-201ENST00000469870 667 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 TRBV8-1-201ENST00000481590 279 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 AL669831.4-202ENST00000590817 238 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.35□□□□□ -2.35
COL6A3P12111 ZNF29P-201ENST00000225587 168 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
COL6A3P12111 RNU6-529P-201ENST00000363383 104 ntBASIC0.35□□□□□ -2.35
COL6A3P12111 AL589994.1-201ENST00000404962 340 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms