Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
IGHV4-38-2P0DP08 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC121333.1-201ENST00000567488 2709 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC008725.1-201ENST00000605123 2263 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 RNU6-845P-201ENST00000362578 103 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 Y_RNA.530-201ENST00000384587 101 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AL592148.1-201ENST00000413568 445 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AL353621.1-201ENST00000418219 243 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 USP9YP20-201ENST00000419224 558 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 snoU13.28-201ENST00000459235 104 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC117503.1-201ENST00000472241 394 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC006445.1-201ENST00000491925 405 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 SNORA19.2-201ENST00000516013 114 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 SNORA14.1-201ENST00000516113 141 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 RNU1-103P-201ENST00000516502 125 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC107934.2-201ENST00000518653 310 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC090136.1-201ENST00000520009 240 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 HMGB1P14-201ENST00000557424 591 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 MIR4738-201ENST00000579134 87 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 LRRC37A5P-203ENST00000580181 585 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 MTND4LP5-201ENST00000605152 292 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AL162274.2-201ENST00000614406 332 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AC063943.3-201ENST00000615562 356 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AL031601.2-202ENST00000622650 282 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 AP001148.1-201ENST00000624124 2359 ntBASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.66□□□□□ -1.98
IGHV4-38-2P0DP08 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
IGHV4-38-2P0DP08 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.65□□□□□ -1.98
IGHV4-38-2P0DP08 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
IGHV4-38-2P0DP08 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.65□□□□□ -1.98
IGHV4-38-2P0DP08 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 MIR412-201ENST00000362142 91 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNA5SP295-201ENST00000362655 121 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNU6-266P-201ENST00000364225 107 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 Y_RNA.414-201ENST00000384011 101 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNU6-831P-201ENST00000384548 107 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNU6-658P-201ENST00000384606 106 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 SNORA40C-201ENST00000391285 128 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 EIF4E2P1-201ENST00000393781 255 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNU2-3P-201ENST00000410144 191 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNU4-47P-201ENST00000410876 114 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNU6-607P-201ENST00000411283 108 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 CYCSP33-201ENST00000414485 327 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AL356968.1-201ENST00000416622 474 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 PDCL2P1-201ENST00000419302 352 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 HMGN2P30-201ENST00000423237 256 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 SKA2P1-201ENST00000425592 390 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AC098614.2-201ENST00000426040 255 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RPL23AP82-202ENST00000427528 469 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AL158071.1-201ENST00000430315 461 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 IFNA20P-201ENST00000436840 528 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 HMGB3P8-201ENST00000449709 577 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNU7-66P-201ENST00000459469 62 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RN7SL863P-201ENST00000462370 296 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RPL23AP62-201ENST00000463396 453 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AC109925.1-201ENST00000478069 331 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RPS29P20-201ENST00000489592 171 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 HMGB1P30-201ENST00000492455 606 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AC046134.1-201ENST00000514454 666 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 SNORA70.14-201ENST00000516205 110 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNA5SP341-201ENST00000516261 117 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNU6-875P-201ENST00000516488 106 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 RNU6-273P-201ENST00000516937 96 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AP000867.2-201ENST00000532468 320 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AC087241.2-201ENST00000535801 324 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 SCOCP1-201ENST00000554676 349 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 MIR4742-201ENST00000581069 85 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AC021646.1-201ENST00000605469 484 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AL357078.3-201ENST00000607528 618 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 AL157817.1-201ENST00000614264 790 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 U2.21-201ENST00000637295 81 ntBASIC2.65□□□□□ -1.99
IGHV4-38-2P0DP08 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms