Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL353705.1-201ENST00000433468 480 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DOAP06340 RPL26P6-201ENST00000440913 438 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 NEFMP1-201ENST00000443423 1006 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 AL137792.2-201ENST00000443484 235 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC104058.1-201ENST00000448028 297 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC133473.1-201ENST00000455173 299 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 SNORD108-201ENST00000459332 71 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC008526.1-201ENST00000509149 338 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 MTCYBP40-201ENST00000509390 1135 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 RPL39P5-202ENST00000512505 151 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 RNU2-69P-201ENST00000516061 100 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 SNORA31.20-201ENST00000517111 133 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 RNU6-840P-201ENST00000517275 65 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 SNRPGP18-201ENST00000553000 214 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC106782.4-201ENST00000568264 210 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC007151.1-201ENST00000572774 483 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 RNA5SP108-201ENST00000605921 117 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC131238.1-201ENST00000617135 328 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DOAP06340 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DOAP06340 MTND5P19-201ENST00000424872 1794 ntBASIC3.83□□□□□ -1.8
HLA-DOAP06340 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DOAP06340 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HLA-DOAP06340 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DOAP06340 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DOAP06340 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
HLA-DOAP06340 MIR422A-201ENST00000362286 90 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 RNU6-1303P-201ENST00000364841 107 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DOAP06340 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DOAP06340 RNU6-601P-201ENST00000384540 107 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 MIR634-201ENST00000385208 97 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 AL139397.2-201ENST00000404529 772 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 RPL7P37-201ENST00000425095 738 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 MTCO1P39-201ENST00000426148 480 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DOAP06340 AL162388.1-201ENST00000450912 352 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 Y_RNA.653-201ENST00000459091 95 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DOAP06340 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DOAP06340 AP004371.1-201ENST00000525240 214 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DOAP06340 FAM60BP-201ENST00000578364 658 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 MIR3671-201ENST00000580455 88 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DOAP06340 AP000654.2-201ENST00000605633 586 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DOAP06340 AC018692.3-201ENST00000623929 123 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 BMS1P21-201ENST00000634565 365 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 AL669831.3-213ENST00000636676 183 ntBASIC3.82□□□□□ -1.8
HLA-DOAP06340 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DOAP06340 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DOAP06340 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 Y_RNA.144-201ENST00000363521 113 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 Y_RNA.145-201ENST00000363527 102 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 Y_RNA.148-201ENST00000363557 117 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 RNU6-1279P-201ENST00000383917 103 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 Y_RNA.422-201ENST00000384054 114 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 RNU6-393P-201ENST00000384475 107 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 AL138885.1-201ENST00000405921 675 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 RNA5SP229-201ENST00000410809 99 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 RNU6-387P-201ENST00000411331 105 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 CST9LP2-201ENST00000437612 320 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 RPL7P28-201ENST00000437739 740 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 AL121871.1-201ENST00000443413 436 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 ELOCP24-201ENST00000456370 334 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 SMURF2P1-201ENST00000514992 481 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 RNU6-1332P-201ENST00000516666 104 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 AC022634.1-201ENST00000520765 532 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 TGIF1P1-201ENST00000558095 802 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 MIR2682-201ENST00000580305 110 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 SNRPGP15-201ENST00000600149 222 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 AL138889.2-201ENST00000603883 242 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 AC007938.3-201ENST00000604965 623 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 RNVU1-4-201ENST00000612985 164 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 SDR42E1P2-201ENST00000614861 481 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 MIR6128-201ENST00000615528 109 ntBASIC3.81□□□□□ -1.8
HLA-DOAP06340 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DOAP06340 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms