Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL512310.1-201ENST00000548639 172 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 OR11H5P-201ENST00000554039 926 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 MIR3199-1-201ENST00000582434 88 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 MIR4435-1-201ENST00000582552 80 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 HMGN1P30-201ENST00000589286 268 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AC034229.4-201ENST00000607861 441 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AC087683.2-201ENST00000611384 326 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AC138749.5-201ENST00000611461 208 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AC116165.2-201ENST00000616705 206 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 MIR6873-201ENST00000622788 63 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 AC099654.13-201ENST00000639774 207 ntBASIC1.88□□□□□ -2.11
HLA-DPB1P04440 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HLA-DPB1P04440 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 RNU5E-5P-201ENST00000365379 116 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 RNU6-1083P-201ENST00000384022 107 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 RNU6-920P-201ENST00000410926 92 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 BRK1P2-201ENST00000442875 223 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 COX6CP12-201ENST00000446748 202 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 KATNBL1P6-201ENST00000453433 915 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC093899.1-201ENST00000457984 376 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 RNU6-953P-201ENST00000459154 107 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC007182.2-201ENST00000489251 402 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC010587.1-201ENST00000505809 469 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC023141.11-201ENST00000508864 202 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 RNU6-572P-201ENST00000516724 80 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 SNORD19.2-201ENST00000516978 73 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC135628.1-201ENST00000568867 534 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 MIR548AB-201ENST00000584917 84 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 NRBF2P1-201ENST00000587407 859 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 MIR15A-201ENST00000607334 83 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC008993.2-201ENST00000631744 806 ntBASIC1.87□□□□□ -2.11
HLA-DPB1P04440 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.87□□□□□ -2.11
HLA-DPB1P04440 AC010329.5-201ENST00000623497 2174 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 MTND4P27-201ENST00000450813 1354 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 RNU5E-1-201ENST00000362477 120 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 RNU5F-7P-201ENST00000363696 115 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 RNU6-553P-201ENST00000364047 96 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 RNU6-960P-201ENST00000364056 120 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 Z98742.3-201ENST00000418637 326 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 HMGN2P38-201ENST00000423806 265 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AL589872.1-201ENST00000426602 288 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 Z98742.2-201ENST00000431564 187 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AP001324.2-201ENST00000461163 319 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 RPS3AP22-201ENST00000488297 769 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 FAM92A1P2-202ENST00000504766 877 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AC109927.2-201ENST00000506416 303 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 RNU2-10P-201ENST00000516375 211 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 Y_RNA.689-201ENST00000516589 107 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 SCARNA16.3-201ENST00000516595 184 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 RNU6-677P-201ENST00000516914 101 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 SNORA31.19-201ENST00000517079 126 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 RNU6-232P-201ENST00000517144 64 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 RNU6-1315P-201ENST00000517187 99 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AL021997.1-201ENST00000605757 193 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AP002360.4-201ENST00000606980 481 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AL360219.1-201ENST00000610230 366 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AL590808.1-201ENST00000618696 141 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AC098657.3-201ENST00000620434 263 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HLA-DPB1P04440 AC079248.2-201ENST00000623779 326 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 CU459211.1-201ENST00000635667 749 ntBASIC1.86□□□□□ -2.11
HLA-DPB1P04440 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms