Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 HMGN1P30-201ENST00000589286 268 ntBASIC2.3□□□□□ -2.04
TGFAP01135 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
TGFAP01135 AC025165.5-201ENST00000602802 578 ntBASIC2.3□□□□□ -2.04
TGFAP01135 AL138889.2-201ENST00000603883 242 ntBASIC2.3□□□□□ -2.04
TGFAP01135 AC012360.2-201ENST00000609349 391 ntBASIC2.3□□□□□ -2.04
TGFAP01135 U6.42-201ENST00000618440 107 ntBASIC2.3□□□□□ -2.04
TGFAP01135 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
TGFAP01135 MTND4P4-201ENST00000439033 1366 ntBASIC2.3□□□□□ -2.04
TGFAP01135 HAUS6P2-201ENST00000433254 2404 ntBASIC2.3□□□□□ -2.04
TGFAP01135 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
TGFAP01135 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AL139276.1-201ENST00000311910 1001 ntBASIC2.29□□□□□ -2.04
TGFAP01135 RNU1-112P-201ENST00000364401 164 ntBASIC2.29□□□□□ -2.04
TGFAP01135 RNU6-487P-201ENST00000365430 104 ntBASIC2.29□□□□□ -2.04
TGFAP01135 RNU6-39P-201ENST00000384344 107 ntBASIC2.29□□□□□ -2.04
TGFAP01135 RNU1-148P-201ENST00000384472 162 ntBASIC2.29□□□□□ -2.04
TGFAP01135 RPS3AP36-201ENST00000398190 775 ntBASIC2.29□□□□□ -2.04
TGFAP01135 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.29□□□□□ -2.04
TGFAP01135 AL160275.3-201ENST00000423876 471 ntBASIC2.29□□□□□ -2.04
TGFAP01135 MTCO2P17-201ENST00000424336 677 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.29□□□□□ -2.04
TGFAP01135 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.29□□□□□ -2.04
TGFAP01135 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TGFAP01135 MED28P2-201ENST00000475771 317 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AC068781.1-201ENST00000488231 618 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.29□□□□□ -2.04
TGFAP01135 AC096725.1-201ENST00000514266 313 ntBASIC2.29□□□□□ -2.04
TGFAP01135 RNA5SP82-201ENST00000516707 92 ntBASIC2.29□□□□□ -2.04
TGFAP01135 RNU6-232P-201ENST00000517144 64 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AP004607.1-201ENST00000524456 203 ntBASIC2.29□□□□□ -2.04
TGFAP01135 CBX3P7-201ENST00000532876 502 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AP002770.2-201ENST00000543613 532 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.29□□□□□ -2.04
TGFAP01135 ZNF321P-202ENST00000550843 495 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.29□□□□□ -2.04
TGFAP01135 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.29□□□□□ -2.04
TGFAP01135 AC008015.1-201ENST00000555505 465 ntBASIC2.29□□□□□ -2.04
TGFAP01135 MTCO3P13-201ENST00000577757 781 ntBASIC2.29□□□□□ -2.04
TGFAP01135 MIR548AC-201ENST00000585049 88 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AL355297.2-201ENST00000604792 129 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AL158032.1-201ENST00000605401 106 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AC018638.7-201ENST00000605836 1114 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AC126118.1-201ENST00000607744 628 ntBASIC2.29□□□□□ -2.04
TGFAP01135 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AC108479.2-201ENST00000617314 601 ntBASIC2.29□□□□□ -2.04
TGFAP01135 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
TGFAP01135 AC080100.1-201ENST00000624239 5356 ntBASIC2.29□□□□□ -2.04
TGFAP01135 AL355596.1-201ENST00000565399 3996 ntBASIC2.29□□□□□ -2.04
TGFAP01135 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TGFAP01135 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.29□□□□□ -2.04
TGFAP01135 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.29□□□□□ -2.04
TGFAP01135 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TGFAP01135 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
TGFAP01135 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
TGFAP01135 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
TGFAP01135 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TGFAP01135 RNU1-72P-201ENST00000362976 153 ntBASIC2.28□□□□□ -2.04
TGFAP01135 SNORD114-19-201ENST00000363072 75 ntBASIC2.28□□□□□ -2.04
TGFAP01135 RNU6-641P-201ENST00000384006 107 ntBASIC2.28□□□□□ -2.04
TGFAP01135 RNA5SP21-201ENST00000410917 96 ntBASIC2.28□□□□□ -2.04
TGFAP01135 RNU6-387P-201ENST00000411331 105 ntBASIC2.28□□□□□ -2.04
TGFAP01135 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.28□□□□□ -2.04
TGFAP01135 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.28□□□□□ -2.04
TGFAP01135 AC007283.2-201ENST00000424739 197 ntBASIC2.28□□□□□ -2.04
TGFAP01135 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.28□□□□□ -2.04
TGFAP01135 TAF9P1-201ENST00000445421 515 ntBASIC2.28□□□□□ -2.04
TGFAP01135 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TGFAP01135 AL513328.1-201ENST00000446460 224 ntBASIC2.28□□□□□ -2.04
TGFAP01135 AC012308.1-201ENST00000451232 178 ntBASIC2.28□□□□□ -2.04
TGFAP01135 UQCRHP3-201ENST00000451503 251 ntBASIC2.28□□□□□ -2.04
TGFAP01135 TAF9P2-201ENST00000454958 515 ntBASIC2.28□□□□□ -2.04
TGFAP01135 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.28□□□□□ -2.04
TGFAP01135 BZW1P2-201ENST00000473537 826 ntBASIC2.28□□□□□ -2.04
TGFAP01135 AC022493.1-201ENST00000492984 337 ntBASIC2.28□□□□□ -2.04
TGFAP01135 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.28□□□□□ -2.04
TGFAP01135 AC008413.1-201ENST00000511864 177 ntBASIC2.28□□□□□ -2.04
TGFAP01135 SNORA25.11-201ENST00000515935 105 ntBASIC2.28□□□□□ -2.04
TGFAP01135 RNU4-29P-201ENST00000515943 174 ntBASIC2.28□□□□□ -2.04
TGFAP01135 RNU6-826P-201ENST00000516827 104 ntBASIC2.28□□□□□ -2.04
TGFAP01135 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.28□□□□□ -2.04
TGFAP01135 AC118273.2-201ENST00000532092 465 ntBASIC2.28□□□□□ -2.04
TGFAP01135 AC091544.4-201ENST00000555268 342 ntBASIC2.28□□□□□ -2.04
TGFAP01135 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.28□□□□□ -2.04
TGFAP01135 AC136619.2-201ENST00000563361 631 ntBASIC2.28□□□□□ -2.04
TGFAP01135 MIR4760-201ENST00000585040 80 ntBASIC2.28□□□□□ -2.04
TGFAP01135 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.28□□□□□ -2.04
TGFAP01135 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.28□□□□□ -2.04
TGFAP01135 AC008121.3-201ENST00000618726 433 ntBASIC2.28□□□□□ -2.04
TGFAP01135 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.28□□□□□ -2.04
TGFAP01135 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.28□□□□□ -2.04
TGFAP01135 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.28□□□□□ -2.04
TGFAP01135 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.28□□□□□ -2.04
TGFAP01135 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TGFAP01135 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TGFAP01135 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.27□□□□□ -2.05
TGFAP01135 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.27□□□□□ -2.05
TGFAP01135 RNU6-858P-201ENST00000362436 107 ntBASIC2.27□□□□□ -2.05
TGFAP01135 U3.6-201ENST00000363622 211 ntBASIC2.27□□□□□ -2.05
TGFAP01135 RNA5SP68-201ENST00000363885 119 ntBASIC2.27□□□□□ -2.05
TGFAP01135 RNU6-72P-201ENST00000384285 79 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms