Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.69□□□□□ -1.98
SIX3O95343 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.69□□□□□ -1.98
SIX3O95343 HSPE1P20-201ENST00000538133 289 ntBASIC2.69□□□□□ -1.98
SIX3O95343 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SIX3O95343 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.69□□□□□ -1.98
SIX3O95343 CYCSP39-201ENST00000565821 309 ntBASIC2.69□□□□□ -1.98
SIX3O95343 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.69□□□□□ -1.98
SIX3O95343 MIR3616-201ENST00000584070 92 ntBASIC2.69□□□□□ -1.98
SIX3O95343 AC245014.2-201ENST00000603689 287 ntBASIC2.69□□□□□ -1.98
SIX3O95343 AC007938.3-201ENST00000604965 623 ntBASIC2.69□□□□□ -1.98
SIX3O95343 Z84480.1-201ENST00000605131 311 ntBASIC2.69□□□□□ -1.98
SIX3O95343 AC246785.4-201ENST00000605374 287 ntBASIC2.69□□□□□ -1.98
SIX3O95343 AC008147.4-201ENST00000617570 1204 ntBASIC2.69□□□□□ -1.98
SIX3O95343 AC025034.2-201ENST00000623264 286 ntBASIC2.69□□□□□ -1.98
SIX3O95343 CKAP2P1-201ENST00000555477 2049 ntBASIC2.69□□□□□ -1.98
SIX3O95343 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.69□□□□□ -1.98
SIX3O95343 AC010329.5-201ENST00000623497 2174 ntBASIC2.68□□□□□ -1.98
SIX3O95343 HSPA8P4-201ENST00000511877 1920 ntBASIC2.68□□□□□ -1.98
SIX3O95343 Y_RNA.226-201ENST00000364337 114 ntBASIC2.68□□□□□ -1.98
SIX3O95343 RPL19P1-201ENST00000411635 428 ntBASIC2.68□□□□□ -1.98
SIX3O95343 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SIX3O95343 OR51A5P-201ENST00000415429 942 ntBASIC2.68□□□□□ -1.98
SIX3O95343 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.68□□□□□ -1.98
SIX3O95343 AC098826.1-201ENST00000433943 471 ntBASIC2.68□□□□□ -1.98
SIX3O95343 GPR143P-201ENST00000434155 205 ntBASIC2.68□□□□□ -1.98
SIX3O95343 AL583843.1-201ENST00000456070 346 ntBASIC2.68□□□□□ -1.98
SIX3O95343 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.68□□□□□ -1.98
SIX3O95343 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.68□□□□□ -1.98
SIX3O95343 AC116655.1-201ENST00000508324 901 ntBASIC2.68□□□□□ -1.98
SIX3O95343 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.68□□□□□ -1.98
SIX3O95343 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.68□□□□□ -1.98
SIX3O95343 AC012414.6-201ENST00000568241 401 ntBASIC2.68□□□□□ -1.98
SIX3O95343 MTCO3P13-201ENST00000577757 781 ntBASIC2.68□□□□□ -1.98
SIX3O95343 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SIX3O95343 MIR548AC-201ENST00000585049 88 ntBASIC2.68□□□□□ -1.98
SIX3O95343 AC091152.3-201ENST00000604227 325 ntBASIC2.68□□□□□ -1.98
SIX3O95343 AL121992.2-201ENST00000606262 256 ntBASIC2.68□□□□□ -1.98
SIX3O95343 AL627309.6-201ENST00000606857 840 ntBASIC2.68□□□□□ -1.98
SIX3O95343 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.68□□□□□ -1.98
SIX3O95343 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.68□□□□□ -1.98
SIX3O95343 CR381653.2-201ENST00000624041 768 ntBASIC2.68□□□□□ -1.98
SIX3O95343 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.68□□□□□ -1.98
SIX3O95343 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SIX3O95343 AC080128.1-201ENST00000474389 1917 ntBASIC2.68□□□□□ -1.98
SIX3O95343 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
SIX3O95343 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SIX3O95343 MTND4P27-201ENST00000450813 1354 ntBASIC2.67□□□□□ -1.98
SIX3O95343 Y_RNA.118-201ENST00000363300 101 ntBASIC2.67□□□□□ -1.98
SIX3O95343 RNU6-169P-201ENST00000365336 107 ntBASIC2.67□□□□□ -1.98
SIX3O95343 RNU6-482P-201ENST00000391068 107 ntBASIC2.67□□□□□ -1.98
SIX3O95343 SNORA40C-201ENST00000391285 128 ntBASIC2.67□□□□□ -1.98
SIX3O95343 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SIX3O95343 AL160275.3-201ENST00000423876 471 ntBASIC2.67□□□□□ -1.98
SIX3O95343 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.67□□□□□ -1.98
SIX3O95343 AC112220.1-201ENST00000434628 355 ntBASIC2.67□□□□□ -1.98
SIX3O95343 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.67□□□□□ -1.98
SIX3O95343 AC244505.5-201ENST00000443639 207 ntBASIC2.67□□□□□ -1.98
SIX3O95343 RPL39P40-201ENST00000445481 146 ntBASIC2.67□□□□□ -1.98
SIX3O95343 EEF1B2P7-201ENST00000451177 676 ntBASIC2.67□□□□□ -1.98
SIX3O95343 AC126389.1-201ENST00000477436 290 ntBASIC2.67□□□□□ -1.98
SIX3O95343 RPL22P13-201ENST00000493291 347 ntBASIC2.67□□□□□ -1.98
SIX3O95343 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.67□□□□□ -1.98
SIX3O95343 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.67□□□□□ -1.98
SIX3O95343 MTND2P38-201ENST00000522536 667 ntBASIC2.67□□□□□ -1.98
SIX3O95343 OR5AL2P-201ENST00000532185 920 ntBASIC2.67□□□□□ -1.98
SIX3O95343 AL356280.1-201ENST00000603614 379 ntBASIC2.67□□□□□ -1.98
SIX3O95343 AL645944.1-201ENST00000603857 493 ntBASIC2.67□□□□□ -1.98
SIX3O95343 AC025811.1-201ENST00000604312 472 ntBASIC2.67□□□□□ -1.98
SIX3O95343 AC064872.1-201ENST00000604823 1072 ntBASIC2.67□□□□□ -1.98
SIX3O95343 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.67□□□□□ -1.98
SIX3O95343 AL589743.7-201ENST00000612637 233 ntBASIC2.67□□□□□ -1.98
SIX3O95343 uc_338.14-201ENST00000613162 166 ntBASIC2.67□□□□□ -1.98
SIX3O95343 AL158063.1-201ENST00000615349 536 ntBASIC2.67□□□□□ -1.98
SIX3O95343 AC072046.2-201ENST00000618366 268 ntBASIC2.67□□□□□ -1.98
SIX3O95343 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SIX3O95343 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SIX3O95343 AC103710.2-202ENST00000641454 2853 ntBASIC2.67□□□□□ -1.98
SIX3O95343 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX3O95343 OR5J1P-201ENST00000313544 939 ntBASIC2.66□□□□□ -1.98
SIX3O95343 RNU6-1179P-201ENST00000384667 107 ntBASIC2.66□□□□□ -1.98
SIX3O95343 AL139039.1-201ENST00000401900 692 ntBASIC2.66□□□□□ -1.98
SIX3O95343 AL513475.1-201ENST00000406602 315 ntBASIC2.66□□□□□ -1.98
SIX3O95343 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.66□□□□□ -1.98
SIX3O95343 RNU6-387P-201ENST00000411331 105 ntBASIC2.66□□□□□ -1.98
SIX3O95343 CALM2P2-201ENST00000428512 440 ntBASIC2.66□□□□□ -1.98
SIX3O95343 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX3O95343 AC009961.2-201ENST00000435771 251 ntBASIC2.66□□□□□ -1.98
SIX3O95343 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.66□□□□□ -1.98
SIX3O95343 RPS15AP9-201ENST00000439856 381 ntBASIC2.66□□□□□ -1.98
SIX3O95343 KATNBL1P3-201ENST00000443475 909 ntBASIC2.66□□□□□ -1.98
SIX3O95343 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX3O95343 AC104058.1-201ENST00000448028 297 ntBASIC2.66□□□□□ -1.98
SIX3O95343 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX3O95343 RNU6-956P-201ENST00000458868 103 ntBASIC2.66□□□□□ -1.98
SIX3O95343 AP001324.2-201ENST00000461163 319 ntBASIC2.66□□□□□ -1.98
SIX3O95343 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX3O95343 AC090525.1-201ENST00000479116 478 ntBASIC2.66□□□□□ -1.98
SIX3O95343 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX3O95343 RBBP4P6-201ENST00000508098 202 ntBASIC2.66□□□□□ -1.98
SIX3O95343 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms