Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 HMGB1P14-201ENST00000557424 591 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 MED28P6-201ENST00000558776 231 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCD1O75127 AC090517.1-201ENST00000569307 266 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 SNRPGP15-201ENST00000600149 222 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 MIR432-201ENST00000606207 94 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.15□□□□□ -1.59
PTCD1O75127 AC064801.1-201ENST00000612025 407 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 MIR1244-1-201ENST00000612829 85 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 AC091953.5-201ENST00000622919 233 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 MIR1244-3-201ENST00000635744 85 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 AL034408.1-202ENST00000636088 415 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 MIR1244-2-201ENST00000636449 85 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 MIR1244-4-202ENST00000636813 85 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 AC009093.8-201ENST00000641769 292 ntBASIC5.15□□□□□ -1.59
PTCD1O75127 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTCD1O75127 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PTCD1O75127 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PTCD1O75127 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PTCD1O75127 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCD1O75127 AL356489.2-201ENST00000566968 3528 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PTCD1O75127 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCD1O75127 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.14□□□□□ -1.59
PTCD1O75127 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCD1O75127 RNA5SP399-201ENST00000364003 117 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 Y_RNA.245-201ENST00000364493 95 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 RNU6-384P-201ENST00000364900 104 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 U8.8-201ENST00000365399 135 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTCD1O75127 AL592148.1-201ENST00000413568 445 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AL096701.2-201ENST00000416920 238 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.14□□□□□ -1.59
PTCD1O75127 RPS3AP46-201ENST00000448352 682 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.14□□□□□ -1.59
PTCD1O75127 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.14□□□□□ -1.59
PTCD1O75127 RNU6-397P-201ENST00000516226 104 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 Y_RNA.700-201ENST00000516806 100 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 RNA5SP290-201ENST00000517133 127 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AC026403.1-201ENST00000518938 295 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.14□□□□□ -1.59
PTCD1O75127 YPEL5P3-201ENST00000547227 352 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.14□□□□□ -1.59
PTCD1O75127 AC004584.2-201ENST00000570407 410 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AC087499.8-201ENST00000578406 226 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 CPDP1-201ENST00000579660 283 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AC010620.2-201ENST00000600135 313 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AL158827.2-201ENST00000602494 330 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AC009314.1-201ENST00000603871 304 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AL161756.2-201ENST00000604597 246 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AC012314.7-201ENST00000619693 93 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AL360181.4-201ENST00000621752 134 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 AL691447.3-201ENST00000635020 330 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.14□□□□□ -1.59
PTCD1O75127 AC092435.4-201ENST00000623012 4159 ntBASIC5.14□□□□□ -1.59
PTCD1O75127 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC5.14□□□□□ -1.59
PTCD1O75127 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCD1O75127 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
PTCD1O75127 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
PTCD1O75127 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCD1O75127 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.13□□□□□ -1.59
PTCD1O75127 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCD1O75127 Y_RNA.19-201ENST00000362462 99 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 RNU4-44P-201ENST00000363050 141 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 Y_RNA.297-201ENST00000364950 91 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 RNU6-827P-201ENST00000365553 106 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 SNORA5A-201ENST00000384111 134 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCD1O75127 TOMM22P1-201ENST00000418578 312 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCD1O75127 AC092423.1-201ENST00000430165 186 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 AC092573.2-201ENST00000434546 243 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCD1O75127 PRSS3P4-201ENST00000453323 162 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 AC013470.1-201ENST00000453438 462 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.13□□□□□ -1.59
PTCD1O75127 AL160314.1-201ENST00000490836 438 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCD1O75127 AC144568.1-201ENST00000520139 137 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 IGLV3-26-201ENST00000520756 302 ntBASIC5.13□□□□□ -1.59
PTCD1O75127 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.13□□□□□ -1.59
PTCD1O75127 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.13□□□□□ -1.59
PTCD1O75127 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.13□□□□□ -1.59
PTCD1O75127 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.13□□□□□ -1.59
PTCD1O75127 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCD1O75127 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PTCD1O75127 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.13□□□□□ -1.59
PTCD1O75127 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCD1O75127 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PTCD1O75127 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
PTCD1O75127 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.12□□□□□ -1.59
PTCD1O75127 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCD1O75127 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PTCD1O75127 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PTCD1O75127 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTCD1O75127 Y_RNA.416-201ENST00000384014 113 ntBASIC5.12□□□□□ -1.59
PTCD1O75127 Y_RNA.478-201ENST00000384358 107 ntBASIC5.12□□□□□ -1.59
PTCD1O75127 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PTCD1O75127 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PTCD1O75127 AL591034.2-201ENST00000402839 359 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms