Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 Y_RNA.581-201ENST00000391017 97 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 AL590704.1-201ENST00000402856 794 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 RNU6-712P-201ENST00000410558 100 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 AL590762.4-201ENST00000425885 253 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 MTND3P9-201ENST00000429526 346 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM13O60858 RPL37P6-201ENST00000460682 294 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 AC091021.1-201ENST00000468051 388 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 SEPT14P8-201ENST00000508026 178 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 RNU6-677P-201ENST00000516914 101 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 SCARNA24.2-201ENST00000516968 130 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 MTND5P41-201ENST00000517498 206 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 TRAV8-5-201ENST00000537369 341 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM13O60858 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.03□□□□□ -1.76
TRIM13O60858 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM13O60858 AC068790.4-201ENST00000602474 263 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 AC025946.2-201ENST00000603398 234 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 AC072026.1-201ENST00000605023 201 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 AL121917.1-203ENST00000605534 577 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 AC005344.1-201ENST00000613391 459 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.03□□□□□ -1.76
TRIM13O60858 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM13O60858 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM13O60858 LINC02555-201ENST00000563933 1951 ntBASIC4.03□□□□□ -1.76
TRIM13O60858 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM13O60858 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM13O60858 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
TRIM13O60858 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
TRIM13O60858 AC007390.2-201ENST00000606229 3803 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM13O60858 AC079741.1-201ENST00000321498 212 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 RNU6-858P-201ENST00000362436 107 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 RNU6-371P-201ENST00000364283 108 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 Y_RNA.439-201ENST00000384119 94 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 RNU1-89P-201ENST00000384592 164 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 MIR550A3-201ENST00000390735 95 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 RNU6-700P-201ENST00000391043 107 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.02□□□□□ -1.77
TRIM13O60858 AL159987.2-201ENST00000432754 307 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM13O60858 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM13O60858 RPL21P41-201ENST00000459863 264 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 AL049830.2-201ENST00000480072 201 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 MRPL42P6-201ENST00000486397 371 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 AC010469.2-201ENST00000496412 480 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
TRIM13O60858 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM13O60858 AC087369.1-201ENST00000520775 996 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 AC010186.2-204ENST00000537668 439 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 AP006289.1-201ENST00000538089 277 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 AC093023.1-201ENST00000547375 507 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 TRAV32-201ENST00000553993 340 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM13O60858 AC022655.2-201ENST00000577280 318 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM13O60858 OR1M4P-201ENST00000589199 287 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM13O60858 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM13O60858 AL034351.1-201ENST00000605288 668 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM13O60858 MIR3976-201ENST00000606807 139 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
TRIM13O60858 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM13O60858 IPO8P1-201ENST00000455509 3109 ntBASIC4.02□□□□□ -1.77
TRIM13O60858 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
TRIM13O60858 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM13O60858 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM13O60858 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM13O60858 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM13O60858 RNU6-595P-201ENST00000363944 107 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 Y_RNA.304-201ENST00000365011 112 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 U8.8-201ENST00000365399 135 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM13O60858 RNU6-47P-201ENST00000383866 107 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 RNU6-22P-201ENST00000384355 107 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 MIR135A2-201ENST00000384854 100 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 AL513475.1-201ENST00000406602 315 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 Y_RNA.626-201ENST00000411288 95 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM13O60858 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM13O60858 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM13O60858 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM13O60858 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM13O60858 AC006011.1-201ENST00000442758 349 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM13O60858 COX6CP14-201ENST00000469580 174 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 RPL29P14-201ENST00000495837 428 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 RNU6-479P-201ENST00000516348 105 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.01□□□□□ -1.77
TRIM13O60858 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM13O60858 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.01□□□□□ -1.77
TRIM13O60858 AC022968.1-201ENST00000567372 442 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 AC005951.2-201ENST00000576282 495 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 AC020914.4-201ENST00000597690 277 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 RNA5SP108-201ENST00000605921 117 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 AC211433.2-201ENST00000608433 387 ntBASIC4.01□□□□□ -1.77
TRIM13O60858 AL590240.4-201ENST00000616908 390 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms