Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.95□□□□□ -2.1
LSM1O15116 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LSM1O15116 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
LSM1O15116 RNY4P24-201ENST00000362735 96 ntBASIC1.95□□□□□ -2.1
LSM1O15116 RNA5SP240-201ENST00000365355 128 ntBASIC1.95□□□□□ -2.1
LSM1O15116 RNU6-898P-201ENST00000365627 104 ntBASIC1.95□□□□□ -2.1
LSM1O15116 RNU6-157P-201ENST00000383957 107 ntBASIC1.95□□□□□ -2.1
LSM1O15116 RNU6-166P-201ENST00000384371 107 ntBASIC1.95□□□□□ -2.1
LSM1O15116 RPL17P50-201ENST00000396131 546 ntBASIC1.95□□□□□ -2.1
LSM1O15116 HMGN2P39-201ENST00000398005 273 ntBASIC1.95□□□□□ -2.1
LSM1O15116 SNORD56-201ENST00000413522 71 ntBASIC1.95□□□□□ -2.1
LSM1O15116 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM1O15116 USP9YP24-201ENST00000434374 697 ntBASIC1.95□□□□□ -2.1
LSM1O15116 AL161788.1-201ENST00000441805 169 ntBASIC1.95□□□□□ -2.1
LSM1O15116 AC009238.1-201ENST00000442165 424 ntBASIC1.95□□□□□ -2.1
LSM1O15116 USP9YP17-201ENST00000444617 696 ntBASIC1.95□□□□□ -2.1
LSM1O15116 AC009237.6-201ENST00000446969 424 ntBASIC1.95□□□□□ -2.1
LSM1O15116 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM1O15116 AL441985.1-201ENST00000457727 251 ntBASIC1.95□□□□□ -2.1
LSM1O15116 SNORD97-201ENST00000459187 142 ntBASIC1.95□□□□□ -2.1
LSM1O15116 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.95□□□□□ -2.1
LSM1O15116 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
LSM1O15116 MTND1P3-201ENST00000484956 952 ntBASIC1.95□□□□□ -2.1
LSM1O15116 RPS3AP22-201ENST00000488297 769 ntBASIC1.95□□□□□ -2.1
LSM1O15116 FAM92A1P2-202ENST00000504766 877 ntBASIC1.95□□□□□ -2.1
LSM1O15116 HSPE1P23-201ENST00000509838 286 ntBASIC1.95□□□□□ -2.1
LSM1O15116 SNORA31.19-201ENST00000517079 126 ntBASIC1.95□□□□□ -2.1
LSM1O15116 SNORA31.23-201ENST00000517219 133 ntBASIC1.95□□□□□ -2.1
LSM1O15116 IGKV3-31-201ENST00000523109 329 ntBASIC1.95□□□□□ -2.1
LSM1O15116 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM1O15116 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM1O15116 AL512310.1-201ENST00000548639 172 ntBASIC1.95□□□□□ -2.1
LSM1O15116 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM1O15116 ARL2BPP2-201ENST00000550907 489 ntBASIC1.95□□□□□ -2.1
LSM1O15116 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.95□□□□□ -2.1
LSM1O15116 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.95□□□□□ -2.1
LSM1O15116 MIR3146-201ENST00000580367 79 ntBASIC1.95□□□□□ -2.1
LSM1O15116 uc_338.12-201ENST00000616344 181 ntBASIC1.95□□□□□ -2.1
LSM1O15116 AC009269.6-201ENST00000621778 588 ntBASIC1.95□□□□□ -2.1
LSM1O15116 AL356266.1-201ENST00000623311 483 ntBASIC1.95□□□□□ -2.1
LSM1O15116 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LSM1O15116 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LSM1O15116 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LSM1O15116 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LSM1O15116 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.94□□□□□ -2.1
LSM1O15116 RNU6-288P-201ENST00000363690 104 ntBASIC1.94□□□□□ -2.1
LSM1O15116 U8.14-201ENST00000390843 143 ntBASIC1.94□□□□□ -2.1
LSM1O15116 FCF1P10-201ENST00000407590 479 ntBASIC1.94□□□□□ -2.1
LSM1O15116 RNU2-36P-201ENST00000410361 191 ntBASIC1.94□□□□□ -2.1
LSM1O15116 XKRYP1-201ENST00000423438 492 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AIMP1P2-201ENST00000425294 312 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.94□□□□□ -2.1
LSM1O15116 AC027124.2-201ENST00000428249 105 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AL035407.1-201ENST00000429211 571 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.94□□□□□ -2.1
LSM1O15116 XKRYP2-201ENST00000432915 492 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.94□□□□□ -2.1
LSM1O15116 RNU6-953P-201ENST00000459154 107 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AC112771.1-201ENST00000463581 102 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.94□□□□□ -2.1
LSM1O15116 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.94□□□□□ -2.1
LSM1O15116 RNU6-1003P-201ENST00000517099 105 ntBASIC1.94□□□□□ -2.1
LSM1O15116 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.94□□□□□ -2.1
LSM1O15116 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.94□□□□□ -2.1
LSM1O15116 MIR4509-3-201ENST00000578671 94 ntBASIC1.94□□□□□ -2.1
LSM1O15116 MIR4509-2-201ENST00000583920 94 ntBASIC1.94□□□□□ -2.1
LSM1O15116 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.94□□□□□ -2.1
LSM1O15116 AL670379.10-201ENST00000604330 253 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AL355297.2-201ENST00000604792 129 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AL670379.9-201ENST00000605428 253 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AC103710.2-201ENST00000609912 942 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AC022202.1-201ENST00000613515 211 ntBASIC1.94□□□□□ -2.1
LSM1O15116 AC005296.1-201ENST00000616145 209 ntBASIC1.94□□□□□ -2.1
LSM1O15116 MIR4509-1-201ENST00000618224 94 ntBASIC1.94□□□□□ -2.1
LSM1O15116 MIR6873-201ENST00000622788 63 ntBASIC1.94□□□□□ -2.1
LSM1O15116 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
LSM1O15116 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LSM1O15116 ZNF702P-202ENST00000434269 1966 ntBASIC1.93□□□□□ -2.1
LSM1O15116 SNORA4.3-201ENST00000365564 137 ntBASIC1.93□□□□□ -2.1
LSM1O15116 SNORA75B-201ENST00000384053 137 ntBASIC1.93□□□□□ -2.1
LSM1O15116 RNU6-83P-201ENST00000384568 112 ntBASIC1.93□□□□□ -2.1
LSM1O15116 AL023284.1-201ENST00000403956 276 ntBASIC1.93□□□□□ -2.1
LSM1O15116 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.93□□□□□ -2.1
LSM1O15116 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.93□□□□□ -2.1
LSM1O15116 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.93□□□□□ -2.1
LSM1O15116 AL078601.1-201ENST00000444542 271 ntBASIC1.93□□□□□ -2.1
LSM1O15116 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.93□□□□□ -2.1
LSM1O15116 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.93□□□□□ -2.1
LSM1O15116 RPL23AP35-201ENST00000451906 501 ntBASIC1.93□□□□□ -2.1
LSM1O15116 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.93□□□□□ -2.1
LSM1O15116 RPL23AP3-201ENST00000453844 468 ntBASIC1.93□□□□□ -2.1
LSM1O15116 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.93□□□□□ -2.1
LSM1O15116 CYP2C59P-201ENST00000457790 269 ntBASIC1.93□□□□□ -2.1
LSM1O15116 AC109927.2-201ENST00000506416 303 ntBASIC1.93□□□□□ -2.1
LSM1O15116 MTND4P2-201ENST00000507767 1203 ntBASIC1.93□□□□□ -2.1
LSM1O15116 RNU6-914P-201ENST00000516749 109 ntBASIC1.93□□□□□ -2.1
LSM1O15116 RNU6-143P-201ENST00000516942 93 ntBASIC1.93□□□□□ -2.1
LSM1O15116 RNU6-1315P-201ENST00000517187 99 ntBASIC1.93□□□□□ -2.1
LSM1O15116 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.93□□□□□ -2.1
LSM1O15116 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms