Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.74□□□□□ -1.97
CLDN4O14493 AC006199.1-201ENST00000548728 219 ntBASIC2.74□□□□□ -1.97
CLDN4O14493 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.74□□□□□ -1.97
CLDN4O14493 CYCSP39-201ENST00000565821 309 ntBASIC2.74□□□□□ -1.97
CLDN4O14493 AL022154.1-201ENST00000604698 785 ntBASIC2.74□□□□□ -1.97
CLDN4O14493 AC069234.5-201ENST00000611056 416 ntBASIC2.74□□□□□ -1.97
CLDN4O14493 AL359198.2-201ENST00000611836 194 ntBASIC2.74□□□□□ -1.97
CLDN4O14493 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLDN4O14493 AC010889.1-201ENST00000566193 2666 ntBASIC2.74□□□□□ -1.97
CLDN4O14493 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CLDN4O14493 ASNSP3-201ENST00000451989 1306 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 ZNF519P1-201ENST00000449011 1626 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN4O14493 RNA5SP126-201ENST00000365092 109 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 RNU4-48P-201ENST00000365559 182 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 Z98749.2-208ENST00000381646 500 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 Y_RNA.436-201ENST00000384097 102 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 GSTA9P-201ENST00000406231 611 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN4O14493 AL031779.1-201ENST00000415663 330 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN4O14493 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN4O14493 AC073464.1-201ENST00000429823 534 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.73□□□□□ -1.97
CLDN4O14493 AL451074.3-201ENST00000437709 472 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 RN7SL75P-201ENST00000461926 281 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AC006512.1-201ENST00000468816 291 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 EIF4EP3-201ENST00000498782 656 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
CLDN4O14493 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.73□□□□□ -1.97
CLDN4O14493 AC113155.1-201ENST00000511141 769 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 RNA5SP503-201ENST00000517047 117 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 RNU6-685P-201ENST00000517088 95 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AL121821.2-201ENST00000556081 394 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AC009063.1-201ENST00000563342 702 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN4O14493 MIR4775-201ENST00000581168 75 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.73□□□□□ -1.97
CLDN4O14493 MIR548AC-201ENST00000585049 88 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AC025449.1-201ENST00000603896 529 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 Z99129.1-201ENST00000612510 255 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 AC011155.2-201ENST00000623202 216 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 SEPT14P19-203ENST00000633205 211 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.73□□□□□ -1.97
CLDN4O14493 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN4O14493 AC093831.2-201ENST00000624393 3427 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN4O14493 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN4O14493 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN4O14493 RNU6-1287P-201ENST00000362914 107 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 Y_RNA.194-201ENST00000363985 102 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 SNORD56.5-201ENST00000364281 72 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN4O14493 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CLDN4O14493 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 RNU6-116P-201ENST00000384042 109 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 RNU6-166P-201ENST00000384371 107 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 RNU6-1060P-201ENST00000384664 107 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 HMGN2P35-201ENST00000412164 270 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AC096649.2-201ENST00000416186 393 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 MTATP6P18-201ENST00000417994 673 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN4O14493 CALM2P2-201ENST00000428512 440 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN4O14493 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN4O14493 Z96811.1-201ENST00000445880 108 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AC104058.1-201ENST00000448028 297 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AC003071.1-201ENST00000451219 789 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AL583843.1-201ENST00000456070 346 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN4O14493 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.72□□□□□ -1.97
CLDN4O14493 TRBV1-201ENST00000476502 284 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AC022493.1-201ENST00000492984 337 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AC079382.1-201ENST00000493346 557 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN4O14493 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CLDN4O14493 SEM1P1-201ENST00000506694 209 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AC117522.3-201ENST00000507974 584 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN4O14493 AC005261.5-201ENST00000596280 355 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 NDUFA8P1-201ENST00000605525 367 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AC008536.2-201ENST00000607284 349 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 AC010338.1-201ENST00000621823 717 ntBASIC2.72□□□□□ -1.97
CLDN4O14493 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN4O14493 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN4O14493 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN4O14493 SNORD3E-201ENST00000362899 217 ntBASIC2.71□□□□□ -1.98
CLDN4O14493 Y_RNA.159-201ENST00000363674 87 ntBASIC2.71□□□□□ -1.98
CLDN4O14493 RNU6-1029P-201ENST00000384109 107 ntBASIC2.71□□□□□ -1.98
CLDN4O14493 RNU2-66P-201ENST00000410650 161 ntBASIC2.71□□□□□ -1.98
CLDN4O14493 RNU2-16P-201ENST00000410712 136 ntBASIC2.71□□□□□ -1.98
CLDN4O14493 EEF1A1P40-201ENST00000412883 573 ntBASIC2.71□□□□□ -1.98
CLDN4O14493 OR6C66P-201ENST00000414917 930 ntBASIC2.71□□□□□ -1.98
CLDN4O14493 AL513477.1-202ENST00000417061 214 ntBASIC2.71□□□□□ -1.98
CLDN4O14493 MTCYBP5-201ENST00000423752 1135 ntBASIC2.71□□□□□ -1.98
CLDN4O14493 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN4O14493 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN4O14493 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN4O14493 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms