Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC118273.2-201ENST00000532092 465 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.66□□□□□ -2.14
UPK1AO00322 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.66□□□□□ -2.14
UPK1AO00322 AL355297.2-201ENST00000604792 129 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 AL157392.4-201ENST00000609756 345 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 MIR5739-201ENST00000619803 80 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 AC024581.2-201ENST00000619986 252 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.66□□□□□ -2.14
UPK1AO00322 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.66□□□□□ -2.14
UPK1AO00322 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.66□□□□□ -2.14
UPK1AO00322 AC103710.2-202ENST00000641454 2853 ntBASIC1.66□□□□□ -2.14
UPK1AO00322 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UPK1AO00322 RNU6-288P-201ENST00000363690 104 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 RNU1-148P-201ENST00000384472 162 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 MIR583-201ENST00000384846 75 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 U8.13-201ENST00000390842 128 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 RNU6-1140P-201ENST00000410517 106 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 AC092648.1-201ENST00000425870 423 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.65□□□□□ -2.15
UPK1AO00322 USP9YP24-201ENST00000434374 697 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 MTCO2P20-201ENST00000437339 673 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 RPL7P54-201ENST00000438336 674 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 BRK1P2-201ENST00000442875 223 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 USP9YP17-201ENST00000444617 696 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.65□□□□□ -2.15
UPK1AO00322 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.65□□□□□ -2.15
UPK1AO00322 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.65□□□□□ -2.15
UPK1AO00322 RNA5SP233-201ENST00000459153 113 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 RNU6-953P-201ENST00000459154 107 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 RPL39P36-201ENST00000490784 156 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
UPK1AO00322 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.65□□□□□ -2.15
UPK1AO00322 SNORA31.23-201ENST00000517219 133 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.65□□□□□ -2.15
UPK1AO00322 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.65□□□□□ -2.15
UPK1AO00322 AP006587.4-201ENST00000526053 529 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 AP004247.1-201ENST00000531556 1289 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.65□□□□□ -2.15
UPK1AO00322 AC012213.3-201ENST00000577199 777 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.65□□□□□ -2.15
UPK1AO00322 AC007229.1-201ENST00000590455 412 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 AC091965.4-201ENST00000607691 587 ntBASIC1.65□□□□□ -2.15
UPK1AO00322 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.65□□□□□ -2.15
UPK1AO00322 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
UPK1AO00322 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
UPK1AO00322 RNU6-769P-201ENST00000384407 104 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 RNU6-817P-201ENST00000391083 104 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 ELOCP17-201ENST00000414751 326 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 RPL23AP39-201ENST00000415533 405 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 ELOCP9-201ENST00000418624 239 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.64□□□□□ -2.15
UPK1AO00322 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.64□□□□□ -2.15
UPK1AO00322 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.64□□□□□ -2.15
UPK1AO00322 AC016691.1-201ENST00000441321 413 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.64□□□□□ -2.15
UPK1AO00322 CYP2C59P-201ENST00000457790 269 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 PMCHL2-203ENST00000457791 237 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AC112771.1-201ENST00000463581 102 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 RNU6-572P-201ENST00000516724 80 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.64□□□□□ -2.15
UPK1AO00322 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.64□□□□□ -2.15
UPK1AO00322 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.64□□□□□ -2.15
UPK1AO00322 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.64□□□□□ -2.15
UPK1AO00322 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.64□□□□□ -2.15
UPK1AO00322 AC010928.2-201ENST00000588017 287 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AC078899.2-201ENST00000595282 212 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AL670379.6-201ENST00000603753 252 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AL670379.11-201ENST00000604059 253 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AC008162.1-201ENST00000604718 254 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AL670379.1-201ENST00000604752 252 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AL670379.5-201ENST00000605253 252 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AL670379.12-201ENST00000605291 253 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AL670379.8-201ENST00000605353 252 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AL670379.7-201ENST00000605823 252 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AC034229.4-201ENST00000607861 441 ntBASIC1.64□□□□□ -2.15
UPK1AO00322 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.64□□□□□ -2.15
UPK1AO00322 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
UPK1AO00322 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
UPK1AO00322 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.63□□□□□ -2.15
UPK1AO00322 TEX21P-201ENST00000447107 1476 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 PIGPP2-201ENST00000411569 458 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.63□□□□□ -2.15
UPK1AO00322 OOSP1P1-201ENST00000423265 274 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 RAC1P6-201ENST00000423911 575 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.63□□□□□ -2.15
UPK1AO00322 AL645568.3-201ENST00000433683 316 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.63□□□□□ -2.15
UPK1AO00322 TIMM9P1-201ENST00000436122 256 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AL353706.1-201ENST00000436728 494 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.63□□□□□ -2.15
UPK1AO00322 AC009238.1-201ENST00000442165 424 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC009237.6-201ENST00000446969 424 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 BTF3P15-201ENST00000455606 336 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.63□□□□□ -2.15
UPK1AO00322 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.63□□□□□ -2.15
UPK1AO00322 RN7SL429P-201ENST00000479090 223 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 RN7SL489P-201ENST00000486185 223 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 RN7SL327P-201ENST00000488659 223 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC140059.1-201ENST00000489238 361 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms