Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
RFXAPO00287 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RFXAPO00287 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFXAPO00287 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFXAPO00287 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFXAPO00287 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.16□□□□□ -1.74
RFXAPO00287 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.16□□□□□ -1.74
RFXAPO00287 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFXAPO00287 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFXAPO00287 Y_RNA.183-201ENST00000363882 113 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 Y_RNA.200-201ENST00000364018 102 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 RNVU1-3-201ENST00000364313 161 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 RNU6-596P-201ENST00000365395 98 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 RNU6-1279P-201ENST00000383917 103 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 MIR625-201ENST00000385047 85 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 MIR1298-201ENST00000408783 112 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 AC092447.6-201ENST00000414578 210 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.16□□□□□ -1.74
RFXAPO00287 AL591704.1-201ENST00000432574 275 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RFXAPO00287 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.16□□□□□ -1.74
RFXAPO00287 NEFMP1-201ENST00000443423 1006 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 AC022431.1-201ENST00000450941 438 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 RPL7P23-201ENST00000493874 747 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.16□□□□□ -1.74
RFXAPO00287 AC006557.5-201ENST00000603126 811 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 MIR6864-201ENST00000617935 70 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.16□□□□□ -1.74
RFXAPO00287 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.16□□□□□ -1.74
RFXAPO00287 AC009229.4-201ENST00000623854 1947 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 AC005183.1-201ENST00000603687 1979 ntBASIC4.16□□□□□ -1.74
RFXAPO00287 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.16□□□□□ -1.74
RFXAPO00287 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RFXAPO00287 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
RFXAPO00287 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFXAPO00287 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RFXAPO00287 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.16□□□□□ -1.74
RFXAPO00287 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RFXAPO00287 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
RFXAPO00287 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RFXAPO00287 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
RFXAPO00287 MAPK10-372ENST00000641954 3413 ntBASIC4.15□□□□□ -1.74
RFXAPO00287 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RFXAPO00287 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.15□□□□□ -1.75
RFXAPO00287 RNU6-989P-201ENST00000362756 107 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 RNU6-1266P-201ENST00000362794 105 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 MIR578-201ENST00000384828 96 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 RNU4-65P-201ENST00000410473 140 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 Y_RNA.793-201ENST00000411222 111 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.15□□□□□ -1.75
RFXAPO00287 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.15□□□□□ -1.75
RFXAPO00287 AC098831.1-201ENST00000440661 216 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.15□□□□□ -1.75
RFXAPO00287 AL360271.2-201ENST00000447710 161 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 AC239809.1-201ENST00000450470 217 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 Y_RNA.644-201ENST00000459006 113 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 RNU4-71P-201ENST00000516258 113 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 Y_RNA.674-201ENST00000516362 113 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 RN7SKP60-201ENST00000516985 239 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.15□□□□□ -1.75
RFXAPO00287 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.15□□□□□ -1.75
RFXAPO00287 CBX3P4-201ENST00000538909 354 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.15□□□□□ -1.75
RFXAPO00287 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.15□□□□□ -1.75
RFXAPO00287 AC136932.1-201ENST00000574771 208 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 RPS29P30-201ENST00000600975 111 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 AC012669.1-201ENST00000603209 283 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 AL355877.2-201ENST00000603670 358 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 AC006329.2-201ENST00000611491 394 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 MIR8058-201ENST00000615737 89 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.15□□□□□ -1.75
RFXAPO00287 AC007998.5-201ENST00000622938 237 ntBASIC4.15□□□□□ -1.75
RFXAPO00287 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.15□□□□□ -1.75
RFXAPO00287 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.15□□□□□ -1.75
RFXAPO00287 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RFXAPO00287 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.15□□□□□ -1.75
RFXAPO00287 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.15□□□□□ -1.75
RFXAPO00287 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RFXAPO00287 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.14□□□□□ -1.75
RFXAPO00287 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RFXAPO00287 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFXAPO00287 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
RFXAPO00287 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.14□□□□□ -1.75
RFXAPO00287 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.14□□□□□ -1.75
RFXAPO00287 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFXAPO00287 MIR335-201ENST00000362173 94 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 RNU6-682P-201ENST00000363843 106 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 RNU6-371P-201ENST00000364283 108 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 Y_RNA.352-201ENST00000365439 102 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 Y_RNA.526-201ENST00000384572 110 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 RPL21P90-201ENST00000415692 466 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.14□□□□□ -1.75
RFXAPO00287 AC069285.2-201ENST00000440210 275 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 DAP3P1-201ENST00000441522 278 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 TMSB4XP3-201ENST00000445144 114 ntBASIC4.14□□□□□ -1.75
RFXAPO00287 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFXAPO00287 AL138752.1-201ENST00000452964 351 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms