Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 RNU6-573P-201ENST00000383938 106 ntBASIC4.92□□□□□ -1.62
H3BM21 SNORA70.10-201ENST00000384515 134 ntBASIC4.92□□□□□ -1.62
H3BM21 MIR153-2-201ENST00000385225 87 ntBASIC4.92□□□□□ -1.62
H3BM21 RPS29P9-201ENST00000440360 171 ntBASIC4.92□□□□□ -1.62
H3BM21 AL353748.1-201ENST00000440753 474 ntBASIC4.92□□□□□ -1.62
H3BM21 AC109327.2-201ENST00000448339 378 ntBASIC4.92□□□□□ -1.62
H3BM21 RNU6-1315P-201ENST00000517187 99 ntBASIC4.92□□□□□ -1.62
H3BM21 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.92□□□□□ -1.62
H3BM21 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.92□□□□□ -1.62
H3BM21 Y_RNA.757-201ENST00000578934 114 ntBASIC4.92□□□□□ -1.62
H3BM21 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.92□□□□□ -1.62
H3BM21 MIR5695-201ENST00000579717 85 ntBASIC4.92□□□□□ -1.62
H3BM21 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.92□□□□□ -1.62
H3BM21 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
H3BM21 AC000123.3-201ENST00000624029 4975 ntBASIC4.92□□□□□ -1.62
H3BM21 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
H3BM21 AC134026.1-201ENST00000623249 2239 ntBASIC4.92□□□□□ -1.62
H3BM21 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.92□□□□□ -1.62
H3BM21 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
H3BM21 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
H3BM21 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
H3BM21 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.91□□□□□ -1.62
H3BM21 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
H3BM21 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
H3BM21 ZNF702P-202ENST00000434269 1966 ntBASIC4.91□□□□□ -1.62
H3BM21 LINC01355-201ENST00000566551 5444 ntBASIC4.91□□□□□ -1.62
H3BM21 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.91□□□□□ -1.62
H3BM21 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
H3BM21 RN7SKP224-201ENST00000364140 325 ntBASIC4.91□□□□□ -1.62
H3BM21 Y_RNA.348-201ENST00000365403 103 ntBASIC4.91□□□□□ -1.62
H3BM21 RNU6-49P-201ENST00000384256 107 ntBASIC4.91□□□□□ -1.62
H3BM21 AC013442.1-201ENST00000397347 228 ntBASIC4.91□□□□□ -1.62
H3BM21 RNU6-588P-201ENST00000410281 105 ntBASIC4.91□□□□□ -1.62
H3BM21 RPS26P47-201ENST00000427219 348 ntBASIC4.91□□□□□ -1.62
H3BM21 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.91□□□□□ -1.62
H3BM21 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.91□□□□□ -1.62
H3BM21 AL353705.4-201ENST00000449661 238 ntBASIC4.91□□□□□ -1.62
H3BM21 RPL23AP49-201ENST00000492925 468 ntBASIC4.91□□□□□ -1.62
H3BM21 BNIP3P1-201ENST00000547295 580 ntBASIC4.91□□□□□ -1.62
H3BM21 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.91□□□□□ -1.62
H3BM21 MIR1273C-201ENST00000578669 77 ntBASIC4.91□□□□□ -1.62
H3BM21 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
H3BM21 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
H3BM21 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
H3BM21 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
H3BM21 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
H3BM21 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
H3BM21 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
H3BM21 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
H3BM21 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
H3BM21 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
H3BM21 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
H3BM21 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.9□□□□□ -1.62
H3BM21 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
H3BM21 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.9□□□□□ -1.62
H3BM21 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
H3BM21 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
H3BM21 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
H3BM21 RNVU1-6-201ENST00000364688 164 ntBASIC4.9□□□□□ -1.63
H3BM21 RNU6-768P-201ENST00000384683 107 ntBASIC4.9□□□□□ -1.63
H3BM21 MIR329-1-201ENST00000385028 80 ntBASIC4.9□□□□□ -1.63
H3BM21 Y_RNA.584-201ENST00000391090 114 ntBASIC4.9□□□□□ -1.63
H3BM21 RNU6-1248P-201ENST00000391096 64 ntBASIC4.9□□□□□ -1.63
H3BM21 SNORA68.2-201ENST00000391263 128 ntBASIC4.9□□□□□ -1.63
H3BM21 BTF3L4P2-201ENST00000392798 346 ntBASIC4.9□□□□□ -1.63
H3BM21 RNA5SP113-201ENST00000410486 84 ntBASIC4.9□□□□□ -1.63
H3BM21 Y_RNA.630-201ENST00000411370 108 ntBASIC4.9□□□□□ -1.63
H3BM21 FAR2P2-201ENST00000413041 594 ntBASIC4.9□□□□□ -1.63
H3BM21 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.9□□□□□ -1.63
H3BM21 MRPL48P1-201ENST00000445390 636 ntBASIC4.9□□□□□ -1.63
H3BM21 AC009220.1-201ENST00000451614 275 ntBASIC4.9□□□□□ -1.63
H3BM21 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.9□□□□□ -1.63
H3BM21 PPIAP21-201ENST00000464473 501 ntBASIC4.9□□□□□ -1.63
H3BM21 RN7SL346P-201ENST00000491561 294 ntBASIC4.9□□□□□ -1.63
H3BM21 AL157871.3-201ENST00000557231 293 ntBASIC4.9□□□□□ -1.63
H3BM21 AC234771.5-201ENST00000600161 514 ntBASIC4.9□□□□□ -1.63
H3BM21 DEFB117-201ENST00000602356 141 ntBASIC4.9□□□□□ -1.63
H3BM21 AL391358.1-201ENST00000605342 190 ntBASIC4.9□□□□□ -1.63
H3BM21 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
H3BM21 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.9□□□□□ -1.63
H3BM21 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
H3BM21 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
H3BM21 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.89□□□□□ -1.63
H3BM21 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.89□□□□□ -1.63
H3BM21 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.89□□□□□ -1.63
H3BM21 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
H3BM21 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3BM21 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3BM21 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.89□□□□□ -1.63
H3BM21 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
H3BM21 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3BM21 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.89□□□□□ -1.63
H3BM21 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
H3BM21 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
H3BM21 SNORA72.2-201ENST00000365028 127 ntBASIC4.89□□□□□ -1.63
H3BM21 RNU6-1145P-201ENST00000384246 107 ntBASIC4.89□□□□□ -1.63
H3BM21 RNU6-541P-201ENST00000384709 110 ntBASIC4.89□□□□□ -1.63
H3BM21 MIR141-201ENST00000384975 95 ntBASIC4.89□□□□□ -1.63
H3BM21 MIR10B-201ENST00000385011 110 ntBASIC4.89□□□□□ -1.63
H3BM21 RPS16P5-201ENST00000406501 404 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms