Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 AL627309.6-201ENST00000606857 840 ntBASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 Y_RNA.812-201ENST00000610788 101 ntBASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 RNVU1-4-201ENST00000612985 164 ntBASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 Y_RNA.784-201ENST00000613803 101 ntBASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 Y_RNA.787-201ENST00000616522 101 ntBASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 Y_RNA.780-201ENST00000617336 101 ntBASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 Y_RNA.801-201ENST00000619005 101 ntBASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 AL713922.2-201ENST00000619384 716 ntBASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPDC1A2A3K4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 RNU6-593P-201ENST00000364716 112 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 RNU6-214P-201ENST00000384130 107 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 RPL7P37-201ENST00000425095 738 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 PIGFP3-201ENST00000441918 722 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 RPS3AP12-201ENST00000443616 753 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 RNU7-152P-201ENST00000458982 64 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 RPL21P10-201ENST00000463521 490 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AC130509.1-201ENST00000464158 433 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 KC877373.1-201ENST00000479066 408 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AC026801.1-201ENST00000497178 464 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 RNA5SP468-201ENST00000516782 93 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AC026371.1-201ENST00000551867 419 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AL163153.1-201ENST00000554223 283 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 MIR3690-201ENST00000580266 75 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AC100830.2-201ENST00000581636 240 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 MIR5690-201ENST00000583739 73 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AC006023.2-201ENST00000609916 167 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 AC010378.1-201ENST00000619270 362 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 MTND5P1-201ENST00000445440 1375 ntBASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PTPDC1A2A3K4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PTPDC1A2A3K4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.09□□□□□ -1.76
PTPDC1A2A3K4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PTPDC1A2A3K4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 RNU6-50P-201ENST00000362356 103 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 Y_RNA.326-201ENST00000365176 113 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 RNU6-601P-201ENST00000384540 107 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 PTMAP5-201ENST00000393073 333 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 RNU2-3P-201ENST00000410144 191 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 RNU6-1025P-201ENST00000410629 104 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 RNU6-954P-201ENST00000411355 107 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 CYCSP33-201ENST00000414485 327 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AL353729.1-201ENST00000425044 720 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AC097713.2-201ENST00000430199 356 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AP003072.1-201ENST00000531740 145 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AC025423.5-201ENST00000550230 219 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 TRAV37-201ENST00000553906 342 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 TRAV28-201ENST00000557548 323 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AC078795.3-201ENST00000602913 472 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AC005183.1-201ENST00000603687 1979 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 ATP5A1P2-202ENST00000616464 443 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 RMST_4.1-201ENST00000616886 107 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AC134503.1-201ENST00000633048 54 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AC093908.1-201ENST00000623125 8092 ntBASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PTPDC1A2A3K4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 AC007785.2-201ENST00000598627 1916 ntBASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 RNU4-35P-201ENST00000362588 141 ntBASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 RNU6-1188P-201ENST00000363795 107 ntBASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 SNORD42.2-201ENST00000365570 69 ntBASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 Y_RNA.639-201ENST00000458981 102 ntBASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 AC027575.1-201ENST00000481064 460 ntBASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 AC005741.1-201ENST00000511094 432 ntBASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 AC022432.1-201ENST00000595739 310 ntBASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 AC005034.5-201ENST00000604219 466 ntBASIC4.07□□□□□ -1.76
PTPDC1A2A3K4 AC080078.3-201ENST00000605407 463 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms