Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TRAV37-201ENST00000553906 342 ntBASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 FGF7P1-201ENST00000582820 288 ntBASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 AC091135.1-201ENST00000585943 307 ntBASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 CTHRC1P1-201ENST00000605383 469 ntBASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 AC012531.5-201ENST00000611375 151 ntBASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 MIR6076-201ENST00000617521 113 ntBASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 U2.21-201ENST00000637295 81 ntBASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 FAM35BP-202ENST00000497389 3337 ntBASIC3.18□□□□□ -1.9
TCRBV7S3A2A0A539 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 MIR412-201ENST00000362142 91 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 SNORD113-7-201ENST00000363762 77 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 SNORD81.2-201ENST00000365153 76 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 RNU6-1035P-201ENST00000384477 107 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 PTMAP2-201ENST00000397627 327 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 RPS4XP3-201ENST00000398541 413 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AC005300.1-201ENST00000428401 373 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AL353705.1-201ENST00000433468 480 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 UQCRHP3-201ENST00000451503 251 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 CEACAMP4-201ENST00000457676 421 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 RPL32P34-201ENST00000486380 400 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 MTND3P25-201ENST00000509243 135 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 NDUFB4P9-201ENST00000511646 388 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 RNU6-864P-201ENST00000516256 108 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 RNU6-703P-201ENST00000516946 107 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 MIR4742-201ENST00000581069 85 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AL022345.1-201ENST00000607292 135 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 AC104985.2-201ENST00000620598 500 ntBASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TCRBV7S3A2A0A539 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 RNU6-254P-201ENST00000363377 107 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 Y_RNA.142-201ENST00000363491 102 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 RNU6-1179P-201ENST00000384667 107 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 SNORA40C-201ENST00000391285 128 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 RPS4XP7-201ENST00000406274 780 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 CYCSP33-201ENST00000414485 327 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AL590664.1-201ENST00000448065 339 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AC091153.1-201ENST00000466297 402 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AC139453.3-201ENST00000493276 369 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 FGF7P4-201ENST00000509595 295 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 RNU7-30P-201ENST00000516835 62 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 SNORA25.17-201ENST00000517184 124 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AC025755.1-201ENST00000521306 278 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 HSPE1P7-201ENST00000604681 321 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AC002076.2-201ENST00000617362 122 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AL031601.2-202ENST00000622650 282 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 AL136164.4-201ENST00000625013 2135 ntBASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TCRBV7S3A2A0A539 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TCRBV7S3A2A0A539 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TCRBV7S3A2A0A539 RNU6-270P-201ENST00000364131 105 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 Y_RNA.212-201ENST00000364177 102 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 Y_RNA.301-201ENST00000364990 103 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 SNORD67-201ENST00000390833 111 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 MIR888-201ENST00000401186 77 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 CYCSP35-201ENST00000451978 304 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 RPL12P25-201ENST00000455592 494 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AC011005.2-201ENST00000487324 359 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AC006445.2-201ENST00000510061 472 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 SNORA19.2-201ENST00000516013 114 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 RNU1-86P-201ENST00000516108 154 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 RNU1-107P-201ENST00000516617 154 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms