Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL356057.2-201ENST00000403318 432 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 RNU2-68P-201ENST00000410878 191 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AL445646.1-201ENST00000431784 216 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC119618.1-201ENST00000434191 222 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC098826.2-201ENST00000452011 651 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 UBL5P3-201ENST00000475112 231 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 RPL31P41-201ENST00000477967 372 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC007182.2-201ENST00000489251 402 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AIG1P1-201ENST00000503376 148 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC098799.2-201ENST00000509466 868 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 NDUFB4P2-201ENST00000509515 391 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC107222.1-201ENST00000510899 637 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC084851.1-201ENST00000529105 249 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC008088.1-201ENST00000580993 280 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC104984.5-201ENST00000586878 94 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 BNIP3P8-201ENST00000597863 560 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC073544.2-201ENST00000601155 540 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 CLIC4P2-201ENST00000601934 717 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 DUSP12P1-201ENST00000612874 516 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 AC110994.2-201ENST00000635481 492 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 Z99571.1-201ENST00000636677 394 ntBASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SMIM28A0A1B0GU29 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 RNU6-248P-201ENST00000410720 107 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 RPS12P24-201ENST00000412619 387 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 ELOCP4-201ENST00000420090 333 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 HMGB1P27-201ENST00000431429 603 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 RPS15AP27-201ENST00000449183 343 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 MTCO2P29-201ENST00000465212 189 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 RPL23AP70-201ENST00000483361 460 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 RPS15AP34-201ENST00000487776 387 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AC009902.1-201ENST00000519351 183 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 SUB1P1-201ENST00000524415 382 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AL158827.2-201ENST00000602494 330 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AL365204.3-201ENST00000612448 685 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AC008250.2-201ENST00000615261 205 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AC078883.4-201ENST00000623218 367 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AL691447.3-201ENST00000635020 330 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AC092881.1-201ENST00000638218 2733 ntBASIC2.26□□□□□ -2.05
SMIM28A0A1B0GU29 AC135776.4-201ENST00000624300 1904 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 RNY4P34-201ENST00000364779 95 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 RNY3P10-201ENST00000384764 102 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 SNORA40.3-201ENST00000390964 122 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 RNU2-2P-201ENST00000410396 191 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC006366.1-201ENST00000422002 759 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC098614.2-201ENST00000426040 255 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AL591212.2-201ENST00000433923 257 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC009961.2-201ENST00000435771 251 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 MTND4P25-201ENST00000441039 533 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 USP9YP15-201ENST00000442391 422 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 MTND2P4-201ENST00000445034 1004 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 MTCYBP1-201ENST00000454315 1119 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC113155.1-201ENST00000511141 769 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 RNU2-10P-201ENST00000516375 211 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 SCARNA24.1-201ENST00000516465 137 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 RNU7-51P-201ENST00000516560 62 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 AC011979.2-201ENST00000527568 352 ntBASIC2.25□□□□□ -2.05
SMIM28A0A1B0GU29 GLYCAM1-201ENST00000546596 285 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms