Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.59□□□□□ -1.52
PCDHGA4Q9Y5G9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
PCDHGA4Q9Y5G9 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDHGA4Q9Y5G9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PCDHGA4Q9Y5G9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
PCDHGA4Q9Y5G9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.59□□□□□ -1.52
PCDHGA4Q9Y5G9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 RNU6-1107P-201ENST00000364817 104 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 Y_RNA.328-201ENST00000365208 113 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 SNORA70-201ENST00000384436 135 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AL603914.1-201ENST00000401964 204 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 RNU6-383P-201ENST00000410864 94 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AC004129.2-201ENST00000457229 287 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 RNU1-88P-201ENST00000459274 128 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 RPS23P1-201ENST00000491662 432 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AC018630.3-201ENST00000542637 96 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AC053481.4-201ENST00000583164 216 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 IMMP1LP3-201ENST00000604197 224 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AC239868.2-201ENST00000564237 4527 ntBASIC5.58□□□□□ -1.52
PCDHGA4Q9Y5G9 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 Y_RNA.243-201ENST00000364481 109 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 RNU6-573P-201ENST00000383938 106 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 Y_RNA.415-201ENST00000384012 112 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 RNU6-171P-201ENST00000384354 107 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 MRPL53P1-201ENST00000414323 319 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 RPL27AP8-201ENST00000424277 446 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 AC109327.2-201ENST00000448339 378 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 RPL26P9-201ENST00000457466 433 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 RPL31P41-201ENST00000477967 372 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 AC006517.1-201ENST00000480485 328 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 AC006445.2-201ENST00000510061 472 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 SNORA40.13-201ENST00000516379 120 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 Y_RNA.690-201ENST00000516603 95 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 AC136601.2-201ENST00000604356 474 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 SNRPGP20-201ENST00000604477 205 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 AC090132.2-201ENST00000615881 347 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 MARK2P15-201ENST00000432204 2186 ntBASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PCDHGA4Q9Y5G9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 OR51H2P-202ENST00000641424 3046 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 MTND5P18-201ENST00000445624 1801 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AC126755.2-208ENST00000327792 462 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AC138969.1-213ENST00000331436 462 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 FAR2P2-201ENST00000413041 594 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 RPS27P18-201ENST00000431701 247 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AC138761.5-201ENST00000433967 325 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 SNRPGP8-201ENST00000454064 226 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 IGLV3-30-201ENST00000524362 298 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AC131055.1-201ENST00000584626 316 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 CU639417.4-201ENST00000623928 207 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AL138820.1-201ENST00000617901 5305 ntBASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA4Q9Y5G9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA4Q9Y5G9 AP004607.3-201ENST00000530354 3915 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms