Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 Y_RNA.327-201ENST00000365201 102 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.56□□□□□ -2.32
AP4S1Q9Y587 RNU6-1080P-201ENST00000383982 107 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 SNORA29-201ENST00000384183 140 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AC027119.1-201ENST00000440877 241 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 MTND1P33-201ENST00000446251 917 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 FDX1P2-201ENST00000450769 375 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 RFC5P1-201ENST00000454419 874 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.56□□□□□ -2.32
AP4S1Q9Y587 RPL31P3-201ENST00000458430 332 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AC145146.1-201ENST00000496370 254 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.56□□□□□ -2.32
AP4S1Q9Y587 MTCYBP16-201ENST00000509187 1129 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AC006199.1-201ENST00000548728 219 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AC098848.2-201ENST00000588023 330 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AC021171.1-201ENST00000603137 706 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AC025754.2-201ENST00000606491 432 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AC092953.2-201ENST00000608000 699 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AC012360.2-201ENST00000609349 391 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.56□□□□□ -2.32
AP4S1Q9Y587 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.56□□□□□ -2.32
AP4S1Q9Y587 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.56□□□□□ -2.32
AP4S1Q9Y587 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.55□□□□□ -2.32
AP4S1Q9Y587 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
AP4S1Q9Y587 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.55□□□□□ -2.32
AP4S1Q9Y587 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.55□□□□□ -2.32
AP4S1Q9Y587 RNU6-386P-201ENST00000362650 107 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AL136133.1-201ENST00000413694 376 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 USP9YP26-201ENST00000421008 661 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 USP9YP18-201ENST00000425912 695 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AL591043.1-201ENST00000432461 424 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AC092473.1-201ENST00000441098 221 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 USP9YP17-201ENST00000444617 696 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.55□□□□□ -2.32
AP4S1Q9Y587 HIGD1AP6-201ENST00000521833 279 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AL713866.2-201ENST00000603579 219 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AC091152.3-201ENST00000604227 325 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AL031176.1-201ENST00000604554 466 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AC084824.5-201ENST00000612009 413 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 AP003400.6-201ENST00000624698 740 ntBASIC0.55□□□□□ -2.32
AP4S1Q9Y587 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
AP4S1Q9Y587 SNORA4.1-201ENST00000364263 144 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 RNU6-968P-201ENST00000384076 107 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 MIR1262-201ENST00000408276 93 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC0.54□□□□□ -2.32
AP4S1Q9Y587 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.54□□□□□ -2.32
AP4S1Q9Y587 PNRC2P1-201ENST00000423940 420 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 AC139712.2-201ENST00000424302 339 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 AC007919.1-201ENST00000429380 217 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 ZYG11AP1-201ENST00000430329 837 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 SNORA31.17-201ENST00000516953 127 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.54□□□□□ -2.32
AP4S1Q9Y587 AC004217.3-201ENST00000551552 878 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 CYP3A52P-201ENST00000563326 91 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 MIR4661-201ENST00000582720 75 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 MIR8063-201ENST00000621930 81 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 AC027335.2-201ENST00000624030 375 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 AC092608.3-201ENST00000625017 386 ntBASIC0.54□□□□□ -2.32
AP4S1Q9Y587 AL138713.1-201ENST00000624026 2130 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 MIR373-201ENST00000362273 69 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AL161651.1-201ENST00000440882 223 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 MTND2P24-201ENST00000453434 806 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.53□□□□□ -2.32
AP4S1Q9Y587 RPL22P13-201ENST00000493291 347 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AC008837.2-201ENST00000513076 418 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 RN7SKP265-201ENST00000516448 223 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 RNU6-113P-201ENST00000516653 101 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 RNU6-667P-201ENST00000517186 102 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AP000907.2-201ENST00000530827 353 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.53□□□□□ -2.32
AP4S1Q9Y587 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.53□□□□□ -2.32
AP4S1Q9Y587 SULT1C2P1-202ENST00000562418 459 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AC008088.1-201ENST00000580993 280 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AP001004.1-201ENST00000582468 324 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 SUMO2P14-201ENST00000604488 293 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AC087045.1-201ENST00000605856 382 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AP005229.2-201ENST00000609980 697 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 AC099063.3-201ENST00000642066 185 ntBASIC0.53□□□□□ -2.32
AP4S1Q9Y587 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
AP4S1Q9Y587 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
AP4S1Q9Y587 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
AP4S1Q9Y587 RNU6-543P-201ENST00000362576 108 ntBASIC0.52□□□□□ -2.33
AP4S1Q9Y587 Y_RNA.140-201ENST00000363474 103 ntBASIC0.52□□□□□ -2.33
AP4S1Q9Y587 RNU6-152P-201ENST00000384037 107 ntBASIC0.52□□□□□ -2.33
AP4S1Q9Y587 SNORA48.1-201ENST00000390879 135 ntBASIC0.52□□□□□ -2.33
AP4S1Q9Y587 RNU2-15P-201ENST00000410692 191 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms