Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 RNU6-166P-201ENST00000384371 107 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AL138885.1-201ENST00000405921 675 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 SRIP3-201ENST00000413200 219 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AL591704.1-201ENST00000432574 275 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 HMGB1P18-201ENST00000438801 619 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 RNU1-98P-201ENST00000458992 160 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 RPS29P26-201ENST00000477483 171 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC096725.1-201ENST00000514266 313 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC022616.8-201ENST00000533569 253 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC022880.1-201ENST00000534017 973 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC092451.2-201ENST00000538746 658 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AL157871.3-201ENST00000557231 293 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 MIR3944-201ENST00000581277 108 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC012065.4-201ENST00000602445 679 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC016925.2-201ENST00000605108 242 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AL160281.1-201ENST00000605307 311 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC067747.1-201ENST00000608026 250 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 AC004908.3-201ENST00000610248 625 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 MTND5P42-201ENST00000637720 498 ntBASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHTOPQ9Y3Y2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 RNU1-58P-201ENST00000362413 163 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 Y_RNA.33-201ENST00000362591 102 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 SNORA70.4-201ENST00000365509 134 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-395P-201ENST00000365662 106 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 MIR597-201ENST00000384968 97 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 MIR9-1-201ENST00000385198 89 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 BTF3L4P2-201ENST00000392798 346 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 UBE2V1P10-201ENST00000414685 269 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 ELOCP17-201ENST00000414751 326 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 ELOCP9-201ENST00000418624 239 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 USP9YP15-201ENST00000442391 422 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 LINC00888-204ENST00000487386 421 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 AC010374.2-201ENST00000512933 535 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 BNIP3P33-201ENST00000598912 569 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 DUXAP9-208ENST00000622815 614 ntBASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CHTOPQ9Y3Y2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-487P-201ENST00000365430 104 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 MIR1262-201ENST00000408276 93 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 RNA5SP501-201ENST00000410990 112 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 HMGN2P23-201ENST00000456759 269 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC126389.1-201ENST00000477436 290 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC109486.1-201ENST00000486833 374 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 MTAPP1-201ENST00000489154 819 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 HMGB1P30-201ENST00000492455 606 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 HIGD1AP13-201ENST00000509878 289 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC114781.4-201ENST00000513707 639 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC135279.1-201ENST00000543493 504 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 BNIP3P27-201ENST00000599991 412 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 BNIP3P19-201ENST00000605397 577 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC091965.5-201ENST00000624785 342 ntBASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CHTOPQ9Y3Y2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 Y_RNA.472-201ENST00000384322 102 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 SNORA67.3-201ENST00000384366 140 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-843P-201ENST00000384454 104 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-1274P-201ENST00000384557 107 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 MIR29B2-201ENST00000385055 81 ntBASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.63□□□□□ -2.15
CHTOPQ9Y3Y2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms