Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC134878.1-201ENST00000619901 243 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 AC024581.2-201ENST00000619986 252 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 MIR488-201ENST00000365739 83 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 RNA5SP187-201ENST00000384400 119 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 RNA5SP113-201ENST00000410486 84 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 ELOCP21-201ENST00000412558 336 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 YPEL5P1-201ENST00000419731 367 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 AC245047.4-201ENST00000433189 144 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 FABP5P15-201ENST00000453566 214 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 RN7SKP19-201ENST00000516016 252 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 RNU6-781P-201ENST00000516377 101 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 SNORA31.19-201ENST00000517079 126 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 AC018630.3-201ENST00000542637 96 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 AC136624.4-201ENST00000573044 370 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 SMG1P6-201ENST00000532337 2930 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 AC018628.1-201ENST00000624147 3819 ntBASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM35Q9UPQ4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 RNU6-527P-201ENST00000363425 104 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 SNORA51.10-201ENST00000384418 136 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 AL133270.1-201ENST00000402635 279 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 U3.40-201ENST00000408706 208 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 snoU109.2-201ENST00000459316 135 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 SCARNA22-201ENST00000503991 125 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 EIF4A2P5-201ENST00000529914 499 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 UBE2Q2P8-201ENST00000560644 102 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 SCARNA4-202ENST00000625402 129 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 MIR3674-201ENST00000636576 68 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 AC093535.2-201ENST00000624769 2326 ntBASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM35Q9UPQ4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 Y_RNA.179-201ENST00000363844 90 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 SNORA51.5-201ENST00000384126 131 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 RNU6-882P-201ENST00000391025 103 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 MIR937-201ENST00000401271 86 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 AC104333.2-201ENST00000422630 192 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 AC007560.1-201ENST00000426912 237 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 RPS27P18-201ENST00000431701 247 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 RNA5SP54-201ENST00000516951 92 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 AP006245.2-201ENST00000522004 300 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 AC093249.4-201ENST00000564755 259 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 AC025166.1-201ENST00000612411 163 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 AC019206.1-201ENST00000621938 425 ntBASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM35Q9UPQ4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 RNVU1-6-201ENST00000364688 164 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 RNA5SP475-201ENST00000410568 110 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 RN7SKP100-201ENST00000411258 284 ntBASIC6.35□□□□□ -1.39
TRIM35Q9UPQ4 RN7SKP53-201ENST00000411337 315 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms