Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC010900.2-201ENST00000604508 210 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AC021753.1-201ENST00000635724 168 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 U6.104-201ENST00000637979 90 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AL359693.1-201ENST00000614959 2407 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RNU6-490P-201ENST00000362985 107 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.170-201ENST00000363746 110 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.214-201ENST00000364201 112 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RNU6-806P-201ENST00000365147 105 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RNY3P13-201ENST00000365542 102 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.416-201ENST00000384014 113 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 SNORD20-201ENST00000384550 80 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 MIR454-201ENST00000390180 115 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RNU2-71P-201ENST00000411395 189 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AL160275.2-201ENST00000412010 394 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 ATG3P1-201ENST00000419507 911 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 NDUFB1P1-201ENST00000435191 180 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RNU6-120P-201ENST00000516077 103 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 SNORD27.1-201ENST00000516319 72 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.683-201ENST00000516508 93 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 RNU6-1038P-201ENST00000516516 104 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 MIR3672-201ENST00000584290 82 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AC006254.3-201ENST00000603353 884 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 AP001485.1-201ENST00000604799 199 ntBASIC5.26□□□□□ -1.57
COL17A1Q9UMD9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AL359893.1-201ENST00000447628 1580 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 RNU4-82P-201ENST00000362443 140 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 RNU6-22P-201ENST00000384355 107 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AC010655.1-201ENST00000449336 292 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AC239809.1-201ENST00000450470 217 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AC243772.1-201ENST00000451620 410 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 RNU7-182P-201ENST00000459009 62 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AC109925.1-201ENST00000478069 331 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 RNU2-10P-201ENST00000516375 211 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 RNU5B-3P-201ENST00000516601 115 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 RNU4-77P-201ENST00000516692 156 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 AC067852.3-201ENST00000589177 561 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 RNVU1-4-201ENST00000612985 164 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 SCN1A-220ENST00000641603 12506 ntBASIC5.25□□□□□ -1.57
COL17A1Q9UMD9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 U3.11-201ENST00000364476 212 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.367-201ENST00000365544 101 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 AC110754.1-201ENST00000399740 601 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 AL606923.1-201ENST00000406616 190 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 ELOCP20-201ENST00000422460 345 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 AL138799.3-201ENST00000438968 350 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 AC099799.1-201ENST00000439809 192 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 AL589765.3-201ENST00000446084 462 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 RPL7L1P1-201ENST00000448259 785 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 AL353752.1-201ENST00000454946 260 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 AC133473.1-201ENST00000455173 299 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 RPL23AP11-201ENST00000475260 469 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 AC091826.1-201ENST00000514065 313 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 RNU6-1278P-201ENST00000516130 107 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 RNU1-41P-201ENST00000516161 162 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 RNU1-48P-201ENST00000516400 162 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 RNU6-570P-201ENST00000517051 105 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 HSBP1P1-201ENST00000555205 166 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 MIR6864-201ENST00000617935 70 ntBASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL17A1Q9UMD9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 SNORA54-201ENST00000384281 123 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 SNORA75.6-201ENST00000391318 127 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms