Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 RPL22P22-201ENST00000395439 379 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 ELOCP14-201ENST00000428070 331 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 ELOCP7-201ENST00000439968 331 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AL022238.1-201ENST00000442557 355 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC017099.1-201ENST00000448261 1028 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 COX6CP18-201ENST00000448769 222 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AL441985.1-201ENST00000457727 251 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 YWHAEP4-201ENST00000505390 198 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AL121821.2-201ENST00000556081 394 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC005668.1-201ENST00000571142 476 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC012213.3-201ENST00000577199 777 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC098826.3-201ENST00000603823 466 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC132825.7-201ENST00000638744 335 ntBASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.88□□□□□ -2.27
COMMD3Q9UBI1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 SNORD65C-201ENST00000390962 71 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 RNU11-3P-201ENST00000391111 133 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AL133264.1-201ENST00000407157 562 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 PIGPP2-201ENST00000411569 458 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 RPL23AP36-201ENST00000413895 458 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 RPL21P90-201ENST00000415692 466 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 MTCO3P1-205ENST00000422088 832 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AL121890.1-201ENST00000435457 205 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 USP9YP35-201ENST00000435696 412 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AC007000.2-201ENST00000442564 487 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AC026410.2-201ENST00000460281 156 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 RN7SL429P-201ENST00000479090 223 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 RN7SL489P-201ENST00000486185 223 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 RN7SL327P-201ENST00000488659 223 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AC093677.1-201ENST00000514414 678 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AC117532.1-201ENST00000514638 323 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 RNU6-667P-201ENST00000517186 102 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 OR5B19P-201ENST00000531766 928 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 MTCO2P15-201ENST00000532655 656 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 PSMA3P-201ENST00000555485 635 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AL355598.1-201ENST00000604169 202 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AC011451.2-201ENST00000604303 598 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AL512598.1-201ENST00000610158 273 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 RN7SL853P-201ENST00000617250 223 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AC017037.3-201ENST00000625016 472 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 AC241585.2-209ENST00000638217 143 ntBASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.87□□□□□ -2.27
COMMD3Q9UBI1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 RNU1-17P-201ENST00000363022 152 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 MIR217-201ENST00000384817 110 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 LUZP4P1-201ENST00000415420 344 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 MTATP6P27-201ENST00000416987 621 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC245102.2-201ENST00000448956 180 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC009474.2-201ENST00000451383 136 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 GTF2IP12-201ENST00000456547 356 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 RN7SKP210-201ENST00000459176 261 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC132942.1-201ENST00000486753 483 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC091917.2-201ENST00000505002 744 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 RPL21P5-201ENST00000554662 472 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC019288.1-201ENST00000557918 224 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AP001542.2-201ENST00000593141 364 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC069304.2-201ENST00000605154 435 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AC091965.5-201ENST00000624785 342 ntBASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.86□□□□□ -2.27
COMMD3Q9UBI1 AL138713.1-201ENST00000624026 2130 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 RNU6-457P-201ENST00000363999 107 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 SUGT1P1-201ENST00000379514 476 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 SNORA70.7-201ENST00000384159 133 ntBASIC0.85□□□□□ -2.27
COMMD3Q9UBI1 RNU6-439P-201ENST00000384188 106 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms