Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AL590808.1-201ENST00000618696 141 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 AC017037.3-201ENST00000625016 472 ntBASIC1.69□□□□□ -2.14
VAPAQ9P0L0 RNU6-288P-201ENST00000363690 104 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 Y_RNA.192-201ENST00000363977 102 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 RNA5SP88-201ENST00000365560 109 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 MIR561-201ENST00000385216 97 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AL591034.2-201ENST00000402839 359 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 RN7SKP266-201ENST00000410232 287 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 RNA5SP450-201ENST00000411206 102 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 RNU6-572P-201ENST00000516724 80 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 DEFB108A-201ENST00000530110 222 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AP000907.2-201ENST00000530827 353 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AC007375.1-201ENST00000554513 578 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 LINC00933-203ENST00000559812 219 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AC243960.4-201ENST00000600532 288 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AL713866.2-201ENST00000603579 219 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 BNIP3P9-201ENST00000603714 553 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AC091953.2-201ENST00000623979 160 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 AC064859.1-201ENST00000624741 174 ntBASIC1.68□□□□□ -2.14
VAPAQ9P0L0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VAPAQ9P0L0 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 RNU6-462P-201ENST00000362659 105 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 RNU6-234P-201ENST00000365229 104 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 RNU6-14P-201ENST00000384630 106 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 MIR95-201ENST00000385072 81 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VAPAQ9P0L0 ERHP2-201ENST00000402323 299 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 SNORD56-201ENST00000413522 71 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.67□□□□□ -2.14
VAPAQ9P0L0 AL445669.1-201ENST00000426743 755 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.67□□□□□ -2.14
VAPAQ9P0L0 AP000949.1-201ENST00000438328 629 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 NEFMP1-201ENST00000443423 1006 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 MTND6P13-201ENST00000443510 523 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 RPL7P36-201ENST00000444633 681 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 AC117503.1-201ENST00000472241 394 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 RPL21P99-201ENST00000480369 423 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 AC020699.1-201ENST00000505161 445 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VAPAQ9P0L0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.67□□□□□ -2.14
VAPAQ9P0L0 AP002770.2-201ENST00000543613 532 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.67□□□□□ -2.14
VAPAQ9P0L0 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 AC005034.5-201ENST00000604219 466 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 AC092953.2-201ENST00000608000 699 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 AC099654.8-201ENST00000637757 681 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VAPAQ9P0L0 AP000776.1-201ENST00000530032 1663 ntBASIC1.67□□□□□ -2.14
VAPAQ9P0L0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
VAPAQ9P0L0 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 MIR449A-201ENST00000362113 91 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 RNU6-1032P-201ENST00000384100 107 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 Y_RNA.465-201ENST00000384293 102 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AL445685.2-201ENST00000422551 342 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 RPL23AP6-201ENST00000446637 472 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 BTF3P15-201ENST00000455606 336 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 RPL39P36-201ENST00000490784 156 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AC018868.1-201ENST00000491307 315 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 MTCYBP43-201ENST00000513621 740 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 RNA5SP216-201ENST00000516111 123 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 SNORA48.11-201ENST00000517015 89 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AC009902.1-201ENST00000519351 183 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AC034114.1-201ENST00000520293 285 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AC010376.1-201ENST00000522101 334 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 OR5AL2P-201ENST00000532185 920 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 PSMA3P-201ENST00000555485 635 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AL670379.10-201ENST00000604330 253 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AL670379.9-201ENST00000605428 253 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 NDUFA8P1-201ENST00000605525 367 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms