Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL442663.2-201ENST00000554385 511 ntBASIC3.34□□□□□ -1.87
NCKIPSDQ9NZQ3 AL118558.2-201ENST00000556294 238 ntBASIC3.34□□□□□ -1.87
NCKIPSDQ9NZQ3 ANP32BP3-201ENST00000559213 706 ntBASIC3.34□□□□□ -1.87
NCKIPSDQ9NZQ3 AC011471.1-201ENST00000585766 187 ntBASIC3.34□□□□□ -1.87
NCKIPSDQ9NZQ3 AC073657.2-201ENST00000605661 303 ntBASIC3.34□□□□□ -1.87
NCKIPSDQ9NZQ3 MIR7112-201ENST00000616126 65 ntBASIC3.34□□□□□ -1.87
NCKIPSDQ9NZQ3 AC068831.7-201ENST00000616954 363 ntBASIC3.34□□□□□ -1.87
NCKIPSDQ9NZQ3 AC007998.5-201ENST00000622938 237 ntBASIC3.34□□□□□ -1.87
NCKIPSDQ9NZQ3 AC027309.3-201ENST00000623419 351 ntBASIC3.34□□□□□ -1.87
NCKIPSDQ9NZQ3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NCKIPSDQ9NZQ3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
NCKIPSDQ9NZQ3 AL137003.2-201ENST00000606924 2538 ntBASIC3.34□□□□□ -1.88
NCKIPSDQ9NZQ3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
NCKIPSDQ9NZQ3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.34□□□□□ -1.88
NCKIPSDQ9NZQ3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
NCKIPSDQ9NZQ3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 RNA5SP197-201ENST00000363357 119 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 Y_RNA.356-201ENST00000365475 113 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-946P-201ENST00000383878 107 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 Y_RNA.529-201ENST00000384586 119 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 SNORA1.3-201ENST00000384676 136 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 Z85995.1-201ENST00000415547 335 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 AL645937.1-202ENST00000421799 937 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 AC009969.1-201ENST00000438726 172 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 FABP5P13-201ENST00000452144 328 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 KC877373.1-201ENST00000479066 408 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 RPL30P14-201ENST00000482744 348 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 Y_RNA.665-201ENST00000516177 98 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 IGHV3-76-201ENST00000522465 295 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 MIR5004-201ENST00000579078 107 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 AC104763.2-201ENST00000604179 382 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 AL136164.4-201ENST00000625013 2135 ntBASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NCKIPSDQ9NZQ3 AC091152.2-201ENST00000591628 2569 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 MIR148B-201ENST00000362252 99 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 SNORD37.1-201ENST00000390968 65 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AL356057.2-201ENST00000403318 432 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AL356432.1-201ENST00000405809 419 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AL353678.1-201ENST00000422735 741 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 ERLEC1P1-201ENST00000433806 578 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 HMGB3P11-201ENST00000440127 604 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AL118496.2-201ENST00000448300 230 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-953P-201ENST00000459154 107 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 RPL27AP5-201ENST00000469428 449 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 RPL21P13-201ENST00000488305 481 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AL160314.1-201ENST00000490836 438 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AC117522.3-201ENST00000507974 584 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 RBBP4P6-201ENST00000508098 202 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 RNA5SP290-201ENST00000517133 127 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-1314P-201ENST00000517139 104 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 SCOCP1-201ENST00000554676 349 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 TRAV28-201ENST00000557548 323 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 RPS3AP23-202ENST00000574601 686 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 MIR4325-201ENST00000583049 90 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AC008521.1-201ENST00000587471 187 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AC034102.8-201ENST00000615146 484 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 MIR6076-201ENST00000617521 113 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AC009248.2-201ENST00000619826 254 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 SNORD39.4-201ENST00000620099 78 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 API5P2-201ENST00000397055 1498 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 AC006026.1-201ENST00000444025 1803 ntBASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NCKIPSDQ9NZQ3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 AL049641.1-201ENST00000441055 1948 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-288P-201ENST00000363690 104 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 Y_RNA.460-201ENST00000384255 102 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU6-14P-201ENST00000384630 106 ntBASIC3.31□□□□□ -1.88
NCKIPSDQ9NZQ3 RNU2-33P-201ENST00000410344 192 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms