Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-626P-201ENST00000363354 107 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 SNORD14B-201ENST00000364533 90 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 SNORA62-201ENST00000365493 153 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 Y_RNA.412-201ENST00000384001 104 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 RNA5SP213-201ENST00000391031 106 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AL022722.2-201ENST00000402519 180 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AL035079.1-201ENST00000405210 287 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 TBCAP2-201ENST00000416175 326 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AL590139.1-201ENST00000416267 400 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AL158156.1-201ENST00000422509 473 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 PTGES3P4-201ENST00000426243 356 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AL590383.1-201ENST00000428602 75 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AC009238.2-201ENST00000431026 355 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AC011742.1-201ENST00000431448 434 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 BX323845.1-201ENST00000432417 179 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 KNOP1P3-201ENST00000446933 426 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 MRPS10P1-201ENST00000448483 130 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 RPL21P13-201ENST00000488305 481 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 HMGB3P3-201ENST00000510526 400 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 RNU7-121P-201ENST00000516604 62 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 RN7SKP49-201ENST00000516675 260 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 RN7SKP272-201ENST00000516988 232 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 SUMO2P18-201ENST00000518873 252 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AC022968.1-201ENST00000567372 442 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AC233702.9-201ENST00000581528 203 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AC010928.2-201ENST00000588017 287 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 AC006001.4-201ENST00000622243 395 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 NCAPGP1-201ENST00000505112 1814 ntBASIC4.93□□□□□ -1.62
CUEDC1Q9NWM3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 Y_RNA.331-201ENST00000365267 102 ntBASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 BTF3L4P2-201ENST00000392798 346 ntBASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 AL513331.1-201ENST00000411908 397 ntBASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 WARS2P1-201ENST00000429678 537 ntBASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 AL627311.1-201ENST00000431514 115 ntBASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 RPS4XP13-201ENST00000483219 789 ntBASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 Y_RNA.686-201ENST00000516548 134 ntBASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 RNA5SP360-201ENST00000516555 118 ntBASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 TOMM20P2-201ENST00000540082 421 ntBASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 BNIP3P1-201ENST00000547295 580 ntBASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
CUEDC1Q9NWM3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 SNURFL-201ENST00000309296 343 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-1175P-201ENST00000365200 107 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 SNORA2.3-201ENST00000383920 135 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-211P-201ENST00000384047 107 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RNA5SP87-201ENST00000384155 118 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RPS16P5-201ENST00000406501 404 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 U3.32-201ENST00000408116 212 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RN7SKP16-201ENST00000410180 299 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 COX5BP7-201ENST00000414780 274 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RPL34P20-201ENST00000442771 351 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RPS5P7-201ENST00000456664 608 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RN7SL443P-201ENST00000464331 290 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-377P-201ENST00000515965 102 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 RNU6-567P-201ENST00000516746 107 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 AC084851.1-201ENST00000529105 249 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 AC040958.1-201ENST00000561102 201 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 AL645944.1-201ENST00000603857 493 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 Y_RNA.802-201ENST00000614892 130 ntBASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.91□□□□□ -1.62
CUEDC1Q9NWM3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms