Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RPL23AP30-201ENST00000432419 501 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC109927.2-201ENST00000506416 303 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC117522.1-201ENST00000509821 380 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 RNU6-1315P-201ENST00000517187 99 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 CKS1BP7-201ENST00000522230 235 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 OR5B19P-201ENST00000531766 928 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC243972.3-201ENST00000539655 198 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC087883.1-201ENST00000551882 391 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC012213.3-201ENST00000577199 777 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AL355877.2-201ENST00000603670 358 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 AC011939.3-201ENST00000613686 466 ntBASIC3.31□□□□□ -1.88
SMC4Q9NTJ3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 Y_RNA.22-201ENST00000362492 102 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 RNU4-24P-201ENST00000364565 139 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 RNU6-1119P-201ENST00000384349 108 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 MIR592-201ENST00000384959 97 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 RPL7P37-201ENST00000425095 738 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 RPL31P35-201ENST00000431058 377 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 MTND1P27-201ENST00000451117 902 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC003071.1-201ENST00000451219 789 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC008571.1-201ENST00000467232 300 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 RPS27AP9-201ENST00000477681 438 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 RPS15AP34-201ENST00000487776 387 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC090572.1-201ENST00000519251 160 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC245014.2-201ENST00000603689 287 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC007938.3-201ENST00000604965 623 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC019159.1-201ENST00000605094 187 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC246785.4-201ENST00000605374 287 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC130324.3-201ENST00000614165 542 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AL359547.2-201ENST00000615810 418 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC138649.3-201ENST00000622154 254 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC092656.1-203ENST00000624134 423 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AL512643.1-201ENST00000635735 524 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AC103710.2-202ENST00000641454 2853 ntBASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SMC4Q9NTJ3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 Y_RNA.194-201ENST00000363985 102 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 RNU1-100P-201ENST00000365255 165 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 NUP35P1-201ENST00000422734 947 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 MTCYBP1-201ENST00000454315 1119 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 KLF3P2-201ENST00000465138 268 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 AC105252.1-201ENST00000503089 286 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 RNU6-826P-201ENST00000516827 104 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 SNORD19.2-201ENST00000516978 73 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 AC009902.1-201ENST00000519351 183 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 AC027807.1-201ENST00000559921 996 ntBASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMC4Q9NTJ3 MTND4P35-201ENST00000604257 1375 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC092809.3-201ENST00000415453 231 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 C1DP2-201ENST00000418167 426 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 HMGN2P10-201ENST00000448085 265 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AL109933.2-201ENST00000452651 260 ntBASIC3.28□□□□□ -1.88
SMC4Q9NTJ3 AC139453.3-201ENST00000493276 369 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms