Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC007363.1-201ENST00000604736 620 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 MIR6861-201ENST00000618657 64 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC009269.6-201ENST00000621778 588 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 AC007204.1-201ENST00000621794 555 ntBASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 FTO-223ENST00000640179 210 ntTSL 5 BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
CDC42SE1Q9NRR8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 CBX3P1-201ENST00000325243 554 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 RNU4-51P-201ENST00000364206 140 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-487P-201ENST00000365430 104 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 SNORA4.3-201ENST00000365564 137 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-701P-201ENST00000384059 107 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 RNU6-622P-201ENST00000384272 103 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AL359704.1-201ENST00000411586 781 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 RPS3AP25-201ENST00000411660 793 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC016831.2-201ENST00000417179 352 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AL445669.1-201ENST00000426743 755 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AL591704.1-201ENST00000432574 275 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AL354941.1-201ENST00000438600 464 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 MTCO2P25-201ENST00000447065 681 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 USP9YP10-201ENST00000454868 628 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 MED28P2-201ENST00000475771 317 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AP001025.1-201ENST00000486139 332 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 RN7SKP256-201ENST00000517201 314 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 SUB1P4-201ENST00000566062 339 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC025678.1-201ENST00000567861 338 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC004987.4-201ENST00000603383 338 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 BNIP3P9-201ENST00000603714 553 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 CYP2C61P-201ENST00000604072 290 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AL022345.1-201ENST00000607292 135 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC093673.2-201ENST00000609674 331 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC046143.2-201ENST00000609789 160 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 uc_338.15-201ENST00000615470 191 ntBASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CDC42SE1Q9NRR8 MIR302D-201ENST00000362275 68 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 MIR422A-201ENST00000362286 90 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 Y_RNA.578-201ENST00000390903 88 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 RN7SKP266-201ENST00000410232 287 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 MTCO1P17-201ENST00000411522 491 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 MRPL35P3-201ENST00000421557 364 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC013262.1-201ENST00000426710 252 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 USP9YP35-201ENST00000435696 412 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 MTCO1P44-201ENST00000441935 243 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AL022238.1-201ENST00000442557 355 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 NEFMP1-201ENST00000443423 1006 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC126389.1-201ENST00000477436 290 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC069528.1-202ENST00000482888 637 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 RPS3AP14-201ENST00000483907 780 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC011825.1-201ENST00000484967 388 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC132942.1-201ENST00000486753 483 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC113347.3-201ENST00000509113 148 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC107393.1-201ENST00000512403 346 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 RNA5SP445-201ENST00000515889 115 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 SNORA31.17-201ENST00000516953 127 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 MTND1P36-201ENST00000522384 936 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 IGKV3-31-201ENST00000523109 329 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC044860.2-201ENST00000561005 179 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC234778.2-201ENST00000566241 354 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 MIR3169-201ENST00000578032 83 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 SNORA77B-201ENST00000578179 125 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC008507.2-201ENST00000588402 1176 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC004908.3-201ENST00000610248 625 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC091834.1-201ENST00000614543 472 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 MIR8074-201ENST00000615081 81 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC048341.3-201ENST00000619323 491 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 MIR6075-201ENST00000620782 95 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC039056.2-201ENST00000622261 511 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 AC093648.1-201ENST00000623546 606 ntBASIC0.78□□□□□ -2.28
CDC42SE1Q9NRR8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 Y_RNA.99-201ENST00000363138 105 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-288P-201ENST00000363690 104 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms