Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 BTF3P7-201ENST00000407097 488 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 USP9YP27-201ENST00000418455 438 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AL109913.1-201ENST00000421173 514 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC000111.3-201ENST00000433478 193 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 BNIP3P2-201ENST00000441221 577 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC009237.8-201ENST00000445492 379 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 FDX1P2-201ENST00000450769 375 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 RPS29P12-201ENST00000460178 152 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 GMFBP1-201ENST00000467831 427 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC006445.2-201ENST00000510061 472 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC108078.2-201ENST00000510750 236 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 RNA5SP503-201ENST00000517047 117 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC245166.1-201ENST00000521012 253 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 TRAV37-201ENST00000553906 342 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 ZNF861P-201ENST00000588126 639 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AL162413.1-201ENST00000603198 110 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 DPPA3P3-201ENST00000603842 430 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC090115.4-201ENST00000609970 188 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC068944.2-201ENST00000610373 403 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AL359547.2-201ENST00000615810 418 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 MTND5P42-201ENST00000637720 498 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 AC103710.2-202ENST00000641454 2853 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 FAM35CP-201ENST00000554755 2470 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
DDX4Q9NQI0 API5P2-201ENST00000397055 1498 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
DDX4Q9NQI0 SNORA62.1-201ENST00000364287 154 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 RNU6-61P-201ENST00000365528 109 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
DDX4Q9NQI0 RPL21P3-201ENST00000395517 478 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 MIR1277-201ENST00000408536 78 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
DDX4Q9NQI0 Z85995.1-201ENST00000415547 335 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX4Q9NQI0 ATG3P1-201ENST00000419507 911 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 AC093106.2-201ENST00000428212 385 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 RPS29P6-201ENST00000438196 145 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 AC146507.2-201ENST00000460608 476 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 RPL30P5-201ENST00000494923 336 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 SNORA31.26-201ENST00000517250 137 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX4Q9NQI0 AC068657.1-201ENST00000520807 306 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX4Q9NQI0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.23□□□□□ -1.89
DDX4Q9NQI0 OR5AL2P-201ENST00000532185 920 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 AK6P1-201ENST00000540219 478 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 AC024619.4-201ENST00000580924 316 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 AC013412.1-201ENST00000610687 192 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.23□□□□□ -1.89
DDX4Q9NQI0 MIR3688-2-201ENST00000636963 87 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.23□□□□□ -1.89
DDX4Q9NQI0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
DDX4Q9NQI0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 RNA5SP68-201ENST00000363885 119 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 RNU6-996P-201ENST00000365438 107 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 RNU6-14P-201ENST00000384630 106 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 RNU6-1158P-201ENST00000391167 107 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 RNU6-1197P-201ENST00000391183 107 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 RNU2-33P-201ENST00000410344 192 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AC080125.1-201ENST00000414888 684 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AL139413.1-201ENST00000421309 217 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 ELOCP14-201ENST00000428070 331 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AL606489.2-201ENST00000433886 234 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 SEPT14P3-201ENST00000439401 183 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 ELOCP7-201ENST00000439968 331 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AC016691.1-201ENST00000441321 413 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AL732372.2-207ENST00000445840 183 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 SEPT14P2-201ENST00000453405 183 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AL121769.1-201ENST00000469473 401 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 MTAPP1-201ENST00000489154 819 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 SEPT14P4-201ENST00000513445 186 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 RNU6-718P-201ENST00000516166 105 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 RNU6-1281P-201ENST00000516223 105 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 SNORA31.21-201ENST00000517180 77 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms